BLASTX nr result

ID: Panax21_contig00037780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037780
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin...    65   6e-09
gb|AFK40678.1| unknown [Lotus japonicus]                               59   3e-07
ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitoch...    58   9e-07
ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   9e-07
ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
           gi|255625921|gb|ACU13305.1| unknown [Glycine max]
          Length = 180

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/53 (66%), Positives = 38/53 (71%)
 Frame = -1

Query: 161 VLACLPPXXXXXXXXSGRVNYSASTKLYVSGLSFRTTEESLRNAFENFGKLVE 3
           VLACLPP        +     S  TKLYVSGLSFRTTEESLRNAF+NFG+LVE
Sbjct: 64  VLACLPPESSTSSSTAKPSFPSPQTKLYVSGLSFRTTEESLRNAFKNFGQLVE 116


>gb|AFK40678.1| unknown [Lotus japonicus]
          Length = 187

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -1

Query: 161 VLACLPPXXXXXXXXSGRVNYSA--STKLYVSGLSFRTTEESLRNAFENFGKLVE 3
           +LACLPP              S+  ST+LYVSGLSFRTTEESLRN F+NFG+LV+
Sbjct: 68  LLACLPPSSESSSSSPSAKPSSSAPSTRLYVSGLSFRTTEESLRNCFKNFGQLVD 122


>ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
           sativus]
          Length = 175

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -1

Query: 101 YSASTKLYVSGLSFRTTEESLRNAFENFGKLVE 3
           Y+ ST+LY+SGLSFRTTEESLRNAF++FG+LVE
Sbjct: 85  YTPSTRLYISGLSFRTTEESLRNAFKSFGQLVE 117


>ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
           [Cucumis sativus]
          Length = 170

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -1

Query: 101 YSASTKLYVSGLSFRTTEESLRNAFENFGKLVE 3
           Y+ ST+LY+SGLSFRTTEESLRNAF++FG+LVE
Sbjct: 85  YTPSTRLYISGLSFRTTEESLRNAFKSFGQLVE 117


>ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|222859004|gb|EEE96551.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/53 (60%), Positives = 35/53 (66%)
 Frame = -1

Query: 161 VLACLPPXXXXXXXXSGRVNYSASTKLYVSGLSFRTTEESLRNAFENFGKLVE 3
           VLACLP                  TKLYVSGLSFRTTEESLRNAF+NFG+LV+
Sbjct: 69  VLACLPSSASSPSSFGFNFR---KTKLYVSGLSFRTTEESLRNAFQNFGQLVD 118


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