BLASTX nr result

ID: Panax21_contig00037740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037740
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15196.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   227   7e-58
ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi...   188   4e-46

>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  229 bits (583), Expect = 2e-58
 Identities = 111/149 (74%), Positives = 130/149 (87%)
 Frame = -1

Query: 457 ARSLREGIQVHGRVMSSGFCSNVVVQTNLVNLYAMVGGEVGFGNARRVFDEMAERNVVTW 278
           +R LREG QVHGRV+++G+C+NV V+T+LVNLYA+ GG  G   ARRVFDE+ +RN+V+W
Sbjct: 43  SRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSW 102

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVE 98
           NSLLAG +RCGDVD ARRIF  MPERNVVSWTTMIAGCAQ GRCKQAL LF++MR+A V+
Sbjct: 103 NSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVK 162

Query: 97  FDQVTLVAALSACAELGDLKLGSWIHSYI 11
            DQV LVAALSACAELGDLKLG+WIHSYI
Sbjct: 163 LDQVALVAALSACAELGDLKLGTWIHSYI 191



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVE 98
           NSL+     CG +D+A ++F  M +R+ +SWT+MI G A+ G  ++AL +F  M++   +
Sbjct: 208 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 267

Query: 97  F---DQVTLVAALSACAELGDLKLG 32
               D +T +  L AC+  G +  G
Sbjct: 268 EGRPDGITFIGVLCACSHAGFVDQG 292


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  229 bits (583), Expect = 2e-58
 Identities = 111/149 (74%), Positives = 130/149 (87%)
 Frame = -1

Query: 457 ARSLREGIQVHGRVMSSGFCSNVVVQTNLVNLYAMVGGEVGFGNARRVFDEMAERNVVTW 278
           +R LREG QVHGRV+++G+C+NV V+T+LVNLYA+ GG  G   ARRVFDE+ +RN+V+W
Sbjct: 129 SRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSW 188

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVE 98
           NSLLAG +RCGDVD ARRIF  MPERNVVSWTTMIAGCAQ GRCKQAL LF++MR+A V+
Sbjct: 189 NSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVK 248

Query: 97  FDQVTLVAALSACAELGDLKLGSWIHSYI 11
            DQV LVAALSACAELGDLKLG+WIHSYI
Sbjct: 249 LDQVALVAALSACAELGDLKLGTWIHSYI 277



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVE 98
           NSL+     CG +D+A ++F  M +R+ +SWT+MI G A+ G  ++AL +F  M++   +
Sbjct: 294 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 353

Query: 97  F---DQVTLVAALSACAELGDLKLG 32
               D +T +  L AC+  G +  G
Sbjct: 354 EGRPDGITFIGVLCACSHAGFVDQG 378


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  227 bits (579), Expect = 7e-58
 Identities = 110/146 (75%), Positives = 128/146 (87%)
 Frame = -1

Query: 448 LREGIQVHGRVMSSGFCSNVVVQTNLVNLYAMVGGEVGFGNARRVFDEMAERNVVTWNSL 269
           LREG QVHGRV+++G+C+NV V+T+LVNLYA+ GG  G   ARRVFDE+ +RN+V+WNSL
Sbjct: 148 LREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSL 207

Query: 268 LAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVEFDQ 89
           LAG +RCGDVD ARRIF  MPERNVVSWTTMIAGCAQ GRCKQAL LF++MR+A V+ DQ
Sbjct: 208 LAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQ 267

Query: 88  VTLVAALSACAELGDLKLGSWIHSYI 11
           V LVAALSACAELGDLKLG+WIHSYI
Sbjct: 268 VALVAALSACAELGDLKLGTWIHSYI 293



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVE 98
           NSL+     CG +D+A ++F  M +R+ +SWT+MI G A+ G  ++AL +F  M++   +
Sbjct: 310 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 369

Query: 97  F---DQVTLVAALSACAELGDLKLG 32
               D +T +  L AC+  G +  G
Sbjct: 370 EGRPDGITFIGVLCACSHAGFVDQG 394


>ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|222850742|gb|EEE88289.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/150 (67%), Positives = 124/150 (82%), Gaps = 3/150 (2%)
 Frame = -1

Query: 451 SLREGIQVHGRVMSSGF-CSNVVVQTNLVNLYA-MVGGE-VGFGNARRVFDEMAERNVVT 281
           SLREG QVH +V+++G+  SNV + + LVN YA +VGGE     +AR+VFD+M+ERNVV 
Sbjct: 141 SLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNVVC 200

Query: 280 WNSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARV 101
           WNS+LAG +R G++D ARRIFY MPERNVVSWTTMI+G A+NG+CKQAL LF+ MRKA V
Sbjct: 201 WNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGV 260

Query: 100 EFDQVTLVAALSACAELGDLKLGSWIHSYI 11
           E DQV L+AAL+ACAELGDLK+G WIHSYI
Sbjct: 261 ELDQVVLLAALTACAELGDLKMGMWIHSYI 290



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = -1

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRK---A 107
           N+L+     CG +DEA  +F  MPER+ VSWT++I   A+ G  +  L +F  M++   +
Sbjct: 307 NALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTS 366

Query: 106 RVEFDQVTLVAALSACAELG 47
               D +T +  L AC+  G
Sbjct: 367 EARPDGITFIGVLCACSHAG 386


>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 478

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/146 (63%), Positives = 111/146 (76%)
 Frame = -1

Query: 448 LREGIQVHGRVMSSGFCSNVVVQTNLVNLYAMVGGEVGFGNARRVFDEMAERNVVTWNSL 269
           ++EG QVH  V+  G+CSNV V T+L+  YA   G  G   AR VFD M +R+VV+WNS+
Sbjct: 57  VKEGEQVHATVLVKGYCSNVFVDTSLITFYA---GRGGVERARHVFDGMPQRSVVSWNSM 113

Query: 268 LAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVEFDQ 89
           LAG +RC D D ARR+F  MP RNVVSWTTM+AGCA+NG+ +QAL LF +MR+A VE DQ
Sbjct: 114 LAGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQ 173

Query: 88  VTLVAALSACAELGDLKLGSWIHSYI 11
           V LVAALSACAELGDLKLG WIH Y+
Sbjct: 174 VALVAALSACAELGDLKLGRWIHWYV 199



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
 Frame = -1

Query: 277 NSLLAGCIRCGDVDEARRIFYAMPERNVVSWTTMIAGCAQNGRCKQALCLFNDMRKARVE 98
           N+L+     CG + EA ++F  MP ++ VSWT+MI   A+ G  K+AL LF  M    V+
Sbjct: 217 NALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVK 276

Query: 97  F-----DQVTLVAALSACAELGDLKLGSWI 23
                 D++T +  L AC+  G +  G  I
Sbjct: 277 VDGVRPDEITFIGVLCACSHAGFVDEGHQI 306