BLASTX nr result

ID: Panax21_contig00037612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037612
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]   132   2e-29
emb|CBI21510.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25

>emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/93 (68%), Positives = 77/93 (82%)
 Frame = +1

Query: 1   ISNDPEDSGSYILLSNIFASKGMWADVKKVREKMDCNRVVKEAGCSWIEMNNEVHMFTAR 180
           IS DP+DSGSYILLSNIFASKGMWADVKKVR++MD + VVKE G SWIE+NN+V++F AR
Sbjct: 636 ISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIAR 695

Query: 181 DRSHRQSDLIYSFIDNLIYHIKGLGNVPDTTTL 279
             +HR++D+I S +D LI HIKG G VPD T L
Sbjct: 696 XTTHREADMIGSVLDILIQHIKGAGYVPDATAL 728


>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = +1

Query: 1   ISNDPEDSGSYILLSNIFASKGMWADVKKVREKMDCNRVVKEAGCSWIEMNNEVHMFTAR 180
           IS DP+DSGSYILLSNIFASKGMWADVKKVR++MD + VVKE G SWIE+NN+V++F AR
Sbjct: 649 ISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIAR 708

Query: 181 DRSHRQSDLIYSFIDNLIYHIKGLGNVPDTTTL 279
           D +HR++D I S +D LI HIKG G VPD T L
Sbjct: 709 DTTHREAD-IGSVLDILIQHIKGAGYVPDATAL 740


>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Vitis vinifera]
          Length = 825

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = +1

Query: 1    ISNDPEDSGSYILLSNIFASKGMWADVKKVREKMDCNRVVKEAGCSWIEMNNEVHMFTAR 180
            IS DP+DSGSYILLSNIFASKGMWADVKKVR++MD + VVKE G SWIE+NN+V++F AR
Sbjct: 728  ISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIAR 787

Query: 181  DRSHRQSDLIYSFIDNLIYHIKGLGNVPDTTTL 279
            D +HR++D I S +D LI HIKG G VPD T L
Sbjct: 788  DTTHREAD-IGSVLDILIQHIKGAGYVPDATAL 819


>ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Glycine max]
          Length = 849

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/92 (70%), Positives = 71/92 (77%)
 Frame = +1

Query: 1    ISNDPEDSGSYILLSNIFASKGMWADVKKVREKMDCNRVVKEAGCSWIEMNNEVHMFTAR 180
            IS DP DSGSYILLSNIFASKGMWA V+ VREKMD +RVVKE G SWIE+NNEVH F AR
Sbjct: 753  ISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIAR 812

Query: 181  DRSHRQSDLIYSFIDNLIYHIKGLGNVPDTTT 276
            D +HR S LI   +DNLI  IKG G VP+  T
Sbjct: 813  DTAHRDSTLISLVLDNLILQIKGFGYVPNAAT 844


>ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Cucumis sativus] gi|449515698|ref|XP_004164885.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/93 (62%), Positives = 71/93 (76%)
 Frame = +1

Query: 1    ISNDPEDSGSYILLSNIFASKGMWADVKKVREKMDCNRVVKEAGCSWIEMNNEVHMFTAR 180
            IS DP DSGSY++LSNIFASKGMW DVK++R KMD N VVKE G SWIE+N EVH+F +R
Sbjct: 741  ISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSR 800

Query: 181  DRSHRQSDLIYSFIDNLIYHIKGLGNVPDTTTL 279
            D+ H ++DLIY  +D L   +K +G V DTT L
Sbjct: 801  DKVHDETDLIYLALDELTTQMKDVGCVHDTTIL 833


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