BLASTX nr result

ID: Panax21_contig00037601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037601
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
emb|CBI30210.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
 Frame = +3

Query: 213 SVQSQPISTLFPQNPTNNSSSFNEEFP-----TISEYGNLLHIAVRYKDIELARAVHASV 377
           S +S+P + L    P +N  +    FP     T++++  LL ++VRY D+EL +AVHAS+
Sbjct: 39  SSRSKPYALLTSHPPLSNQPALLSNFPSVSNDTVNDHYYLLDLSVRYDDVELIKAVHASI 98

Query: 378 LKLEQEDILLWNTLLAAYLKLG 443
            KL  EDI L N L+ AYLKLG
Sbjct: 99  FKL-AEDIHLANALIVAYLKLG 119


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
 Frame = +3

Query: 213 SVQSQPISTLFPQNPTNNSSSFNEEFP-----TISEYGNLLHIAVRYKDIELARAVHASV 377
           S +S+P + L    P +N  +    FP     T++++  LL ++VRY D+EL +AVHAS+
Sbjct: 57  SSRSKPYALLTSHPPLSNQPALLSNFPSVSNDTVNDHYYLLDLSVRYDDVELIKAVHASI 116

Query: 378 LKLEQEDILLWNTLLAAYLKLG 443
            KL  EDI L N L+ AYLKLG
Sbjct: 117 FKL-AEDIHLANALIVAYLKLG 137


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/63 (53%), Positives = 41/63 (65%)
 Frame = +3

Query: 255 PTNNSSSFNEEFPTISEYGNLLHIAVRYKDIELARAVHASVLKLEQEDILLWNTLLAAYL 434
           P   S S N    TI+   +LL ++ RY D +LARAVHA  LKLE EDI L N L++AYL
Sbjct: 83  PLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLKLE-EDIFLGNALISAYL 141

Query: 435 KLG 443
           KLG
Sbjct: 142 KLG 144


>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/63 (53%), Positives = 41/63 (65%)
 Frame = +3

Query: 255 PTNNSSSFNEEFPTISEYGNLLHIAVRYKDIELARAVHASVLKLEQEDILLWNTLLAAYL 434
           P   S S N    TI+   +LL ++ RY D +LARAVHA  LKLE EDI L N L++AYL
Sbjct: 83  PLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLKLE-EDIFLGNALISAYL 141

Query: 435 KLG 443
           KLG
Sbjct: 142 KLG 144


>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +3

Query: 225 QPISTLFPQNPTNNSSSFNEE-FPTISEYGNLLHIAVRYKDIELARAVHASVLKLEQEDI 401
           Q + + FP +   +S   N +    + +  NLL ++V+Y DI+LARA+HAS+LKL  ED 
Sbjct: 79  QNLESSFPLDSNYHSPQTNTDCLIEVDDLFNLLRLSVKYTDIDLARALHASILKL-GEDT 137

Query: 402 LLWNTLLAAYLKLG 443
            L N ++AAY+KLG
Sbjct: 138 HLGNAVIAAYIKLG 151


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