BLASTX nr result

ID: Panax21_contig00037593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037593
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi...   177   2e-42
emb|CBI30244.3| unnamed protein product [Vitis vinifera]              172   7e-41
ref|NP_181190.3| protein ROS1 [Arabidopsis thaliana] gi|71658826...   171   1e-40
emb|CBI17085.3| unnamed protein product [Vitis vinifera]              171   1e-40
gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]     171   2e-40

>ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi|223531981|gb|EEF33793.1|
            Protein ROS1, putative [Ricinus communis]
          Length = 1634

 Score =  177 bits (450), Expect = 2e-42
 Identities = 107/255 (41%), Positives = 151/255 (59%), Gaps = 2/255 (0%)
 Frame = -1

Query: 759  CSAEKDRLSSNENMDLESNSKESGNQKSGSIEQTSGNHEPFSKISTAPFELNVDLFDRFG 580
            C   +    +N+ + L+ +   S N  +  I+QT+   E FS  S A F   V    R  
Sbjct: 982  CDVREKTRVTNDALSLQHSVFSSHNFVNSPIDQTAERKEAFSG-SEAGF---VTEGHRPN 1037

Query: 579  FSSERDMEGVESKDEINEPLKLSVRETTTQQKATPGVQEQITVDPVSLQSKVTTEQNINH 400
              ++  ++ +ES   +++P ++ +++TT       G  E   +D ++             
Sbjct: 1038 MLNKETLDTMESSSALDKP-EIFLQKTTESDMIEHGFSEIKELDEMNA------------ 1084

Query: 399  LGRKISTPRKKASKVETKQETTIDWDELRRTYCS--KEREKDDNAMDSVDWEAVRNATVE 226
                 +T + K+ +V  +    +DWD LR+   +  ++RE+  N MDS+DWEAVR A V 
Sbjct: 1085 -----ATRKAKSRRVGKEIREDVDWDALRKQVEANGRKRERTPNTMDSLDWEAVRCAEVN 1139

Query: 225  EIAQTIAQRGMNNVLAARIKNFLERMVKDHGKIDLEWLRDVPPDKAKEFLLSIDGLGLKS 46
            +IA TI +RGMNNVLA RIKNFL R+V++HG IDLEWLRDVPPDKAKE+LLSI GLGLKS
Sbjct: 1140 DIANTIKERGMNNVLAERIKNFLNRLVREHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKS 1199

Query: 45   VECIRLLTLHHNAFP 1
            VEC+RLLTLHH AFP
Sbjct: 1200 VECVRLLTLHHLAFP 1214


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score =  172 bits (436), Expect = 7e-41
 Identities = 109/270 (40%), Positives = 147/270 (54%), Gaps = 10/270 (3%)
 Frame = -1

Query: 780  TDFLRQFCSAEKDRLS-----SNENMDLESNSKESGNQKSGSIEQTSGNHEPFSKISTAP 616
            T F+     AE  RL      SN N    +N K+           T  NH PF       
Sbjct: 800  TSFVGLLQMAESTRLHEVFCRSNINATCGANPKDF----------TGSNHYPFH------ 843

Query: 615  FELNVDLFDRFGFSSERDMEGVESKDEINEPLKL---SVRETTTQQKATPGVQEQITVDP 445
                       G ++E D +  + K ++ E ++    S  E T       G   +I  + 
Sbjct: 844  -----------GLTAESDNQAKDEK-KLTESIQAGPTSSCENTFSDNNLQGENNKIIDET 891

Query: 444  VSLQSKVTTEQNINHLGRKISTPRKKASKVETKQETTIDWDELRRT--YCSKEREKDDNA 271
               +  +++ +  N +G  + T + K  K   +++ T+ WD LR+      ++RE+  N 
Sbjct: 892  GVKEHGLSSSKASNEIG--VDTSKAKKGKARREEKNTLHWDNLRKEAQVNGRKRERTVNT 949

Query: 270  MDSVDWEAVRNATVEEIAQTIAQRGMNNVLAARIKNFLERMVKDHGKIDLEWLRDVPPDK 91
            MDS+DWEAVR + V EIA TI +RGMNN+LA RIK+FL R+V+DHG IDLEWLRDVPPDK
Sbjct: 950  MDSLDWEAVRCSDVNEIANTIKERGMNNMLAERIKDFLNRLVRDHGSIDLEWLRDVPPDK 1009

Query: 90   AKEFLLSIDGLGLKSVECIRLLTLHHNAFP 1
            AKE+LLS  GLGLKSVEC+RLLTLHH AFP
Sbjct: 1010 AKEYLLSFRGLGLKSVECVRLLTLHHLAFP 1039


>ref|NP_181190.3| protein ROS1 [Arabidopsis thaliana]
            gi|71658826|sp|Q9SJQ6.2|ROS1_ARATH RecName: Full=Protein
            ROS1; AltName: Full=DEMETER-like protein 1; AltName:
            Full=Repressor of silencing 1 gi|30909281|gb|AAP37178.1|
            ROS1 [Arabidopsis thaliana] gi|330254169|gb|AEC09263.1|
            protein ROS1 [Arabidopsis thaliana]
          Length = 1393

 Score =  171 bits (434), Expect = 1e-40
 Identities = 109/286 (38%), Positives = 161/286 (56%), Gaps = 34/286 (11%)
 Frame = -1

Query: 756  SAEKDRLSSNENMDLESNSKE--SGNQKSGSIEQTSGNHE----------------PFSK 631
            S+ +  +S++E++D  ++SKE    ++K  S+E    + +                  S 
Sbjct: 689  SSSEIAISAHESVDKTTDSKEYVDSDRKGSSVEVDKTDEKCRVLNLFPSEDSALTCQHSM 748

Query: 630  ISTAPFELNVDLFDRFGFSSERDMEG--------------VESKDEINEPLKLSVRETTT 493
            +S AP        +R G SSE D+EG              V  +D       +S  + ++
Sbjct: 749  VSDAPQNT-----ERAGSSSEIDLEGEYRTSFMKLLQGVQVSLEDSNQVSPNMSPGDCSS 803

Query: 492  QQKATPGVQEQITVDPVSLQSKVTTEQNINHLGRKISTPRKKASKVETKQETTIDWDELR 313
            + K    ++E       S +    ++Q+ + L  +  T ++K  KV  +++   DWD LR
Sbjct: 804  EIKGFQSMKEPTKSSVDSSEPGCCSQQDGDVLSCQKPTLKEKGKKVLKEEKKAFDWDCLR 863

Query: 312  RTYCSKE--REKDDNAMDSVDWEAVRNATVEEIAQTIAQRGMNNVLAARIKNFLERMVKD 139
            R   ++   REK  + MD+VDW+A+R A V+E+A+TI  RGMN+ LA RI+ FL+R+V D
Sbjct: 864  REAQARAGIREKTRSTMDTVDWKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVND 923

Query: 138  HGKIDLEWLRDVPPDKAKEFLLSIDGLGLKSVECIRLLTLHHNAFP 1
            HG IDLEWLRDVPPDKAKE+LLS +GLGLKSVEC+RLLTLHH AFP
Sbjct: 924  HGSIDLEWLRDVPPDKAKEYLLSFNGLGLKSVECVRLLTLHHLAFP 969


>emb|CBI17085.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  171 bits (434), Expect = 1e-40
 Identities = 84/146 (57%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = -1

Query: 435 QSKVTTEQNINHLGRKISTPRKKASKVETKQETTIDWDELRRTYCSKERE-KDDNAMDSV 259
           Q + T  +N+N+      +   K  K   K++ + DWD LRR Y ++ R+ +  +A DS+
Sbjct: 346 QIQFTENKNLNN------SNEGKRGKTNDKEDHSFDWDSLRRFYSNRGRKSRIHDARDSL 399

Query: 258 DWEAVRNATVEEIAQTIAQRGMNNVLAARIKNFLERMVKDHGKIDLEWLRDVPPDKAKEF 79
           DWEAVR+A V  +A+ I+ RGMNNVLAARIK+FL+R+V+DHGK+DLEWLRDVPP+KAK++
Sbjct: 400 DWEAVRDANVTHVAKAISTRGMNNVLAARIKDFLDRLVRDHGKLDLEWLRDVPPEKAKDY 459

Query: 78  LLSIDGLGLKSVECIRLLTLHHNAFP 1
           LLSI GLGLKSVEC+RLLTLHH+AFP
Sbjct: 460 LLSIRGLGLKSVECVRLLTLHHHAFP 485


>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score =  171 bits (432), Expect = 2e-40
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399  LGRKISTPRKKASKVETKQETTIDWDELRRT--YCSKEREKDDNAMDSVDWEAVRNATVE 226
            L   +   + +  KV+ +++   DWD LR+      ++REK +  MDS+DWEAVR A V 
Sbjct: 1180 LNSMVGELKSEGRKVKKEKKDDFDWDSLRKQTEVNGRKREKTERTMDSLDWEAVRCAEVH 1239

Query: 225  EIAQTIAQRGMNNVLAARIKNFLERMVKDHGKIDLEWLRDVPPDKAKEFLLSIDGLGLKS 46
            EIA+TI +RGMNNVLA RIK+FL R+V+DHG IDLEWLRDVPPDKAKE+LLSI GLGLKS
Sbjct: 1240 EIAETIKERGMNNVLAQRIKDFLNRLVRDHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKS 1299

Query: 45   VECIRLLTLHHNAFP 1
            VEC+RLLTLHH AFP
Sbjct: 1300 VECVRLLTLHHLAFP 1314


Top