BLASTX nr result

ID: Panax21_contig00037577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037577
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
emb|CBI24939.3| unnamed protein product [Vitis vinifera]              133   2e-29
emb|CAN83407.1| hypothetical protein VITISV_022679 [Vitis vinifera]   133   2e-29
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...    92   6e-17

>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Vitis vinifera]
          Length = 538

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/110 (63%), Positives = 83/110 (75%)
 Frame = +1

Query: 61  MELHLLDTSNLRWSSSSFFLASTTCSTKVLTEQTNPLNPPILVTKAAKKNLENSSRGLQK 240
           ME HLLD ++LRWSSS   L  TTCS KVL E     NPP L  +A K++  +S  GLQ+
Sbjct: 1   MEPHLLDPTSLRWSSS-IPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQR 59

Query: 241 SSKKNLSHILRTEAAISAIERKANSRKYTRLWPKAILEALDDAIRENRWQ 390
             KK+LS ILRTEAAIS IERKANSRKY+ LWPKA+LEALD+AIRENR++
Sbjct: 60  QPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYE 109


>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/110 (63%), Positives = 83/110 (75%)
 Frame = +1

Query: 61  MELHLLDTSNLRWSSSSFFLASTTCSTKVLTEQTNPLNPPILVTKAAKKNLENSSRGLQK 240
           ME HLLD ++LRWSSS   L  TTCS KVL E     NPP L  +A K++  +S  GLQ+
Sbjct: 1   MEPHLLDPTSLRWSSS-IPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQR 59

Query: 241 SSKKNLSHILRTEAAISAIERKANSRKYTRLWPKAILEALDDAIRENRWQ 390
             KK+LS ILRTEAAIS IERKANSRKY+ LWPKA+LEALD+AIRENR++
Sbjct: 60  QPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYE 109


>emb|CAN83407.1| hypothetical protein VITISV_022679 [Vitis vinifera]
          Length = 166

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/110 (63%), Positives = 83/110 (75%)
 Frame = +1

Query: 61  MELHLLDTSNLRWSSSSFFLASTTCSTKVLTEQTNPLNPPILVTKAAKKNLENSSRGLQK 240
           ME HLLD ++LRWSSS   L  TTCS KVL E     NPP L  +A K++  +S  GLQ+
Sbjct: 1   MEPHLLDPTSLRWSSS-IPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQR 59

Query: 241 SSKKNLSHILRTEAAISAIERKANSRKYTRLWPKAILEALDDAIRENRWQ 390
             KK+LS ILRTEAAIS IERKANSRKY+ LWPKA+LEALD+AIRENR++
Sbjct: 60  QPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYE 109


>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/100 (53%), Positives = 68/100 (68%)
 Frame = +1

Query: 91  LRWSSSSFFLASTTCSTKVLTEQTNPLNPPILVTKAAKKNLENSSRGLQKSSKKNLSHIL 270
           + WS S     ST  S  +LT      +P  L  +++K   + +S GLQ+ SKK LS IL
Sbjct: 1   MSWSLS----ISTPPSKNLLTGSNGNQDPQFLTIQSSKWCPDPTSTGLQRQSKKELSRIL 56

Query: 271 RTEAAISAIERKANSRKYTRLWPKAILEALDDAIRENRWQ 390
           RTEAAI AIE+KANS+KY  LWPKA+LEALDDAI+EN+W+
Sbjct: 57  RTEAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWE 96


>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/110 (47%), Positives = 69/110 (62%)
 Frame = +1

Query: 61  MELHLLDTSNLRWSSSSFFLASTTCSTKVLTEQTNPLNPPILVTKAAKKNLENSSRGLQK 240
           M  H +  +NL WS S      T    KVL E+    +PPIL   ++  + +    G ++
Sbjct: 1   MHPHPISYTNLYWSYS-ISTPPTIHLIKVLKERNFHSDPPILGIHSSNLSSDLIPVGPKR 59

Query: 241 SSKKNLSHILRTEAAISAIERKANSRKYTRLWPKAILEALDDAIRENRWQ 390
            +KK LS  LRT+AAI AIE+KA+S KY RLWPKA+LEALDDAI+E RW+
Sbjct: 60  HTKKELSRFLRTDAAIKAIEQKADSSKYNRLWPKAVLEALDDAIKERRWK 109


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