BLASTX nr result

ID: Panax21_contig00037557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037557
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-contain...   160   1e-37
ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-contain...   150   1e-34
ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-contain...   150   1e-34
ref|XP_002874820.1| transducin family protein [Arabidopsis lyrat...   150   1e-34
ref|NP_567275.1| transducin/WD40 domain-containing protein [Arab...   148   4e-34

>ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-containing protein C1672.07
           isoform 1 [Vitis vinifera] gi|297740341|emb|CBI30523.3|
           unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/80 (97%), Positives = 80/80 (100%)
 Frame = +1

Query: 157 MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 336
           MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR
Sbjct: 1   MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 60

Query: 337 ALASYRNYTFAAYGNDIAVY 396
           ALASYR+YTFAAYGNDIAV+
Sbjct: 61  ALASYRDYTFAAYGNDIAVF 80


>ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/80 (90%), Positives = 79/80 (98%)
 Frame = +1

Query: 157 MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 336
           MGIFEP+RAIGYIT++VPFSVQRLGTETFVTVSVGKA+Q+YNCAKLNLVLVGPQLPKKIR
Sbjct: 1   MGIFEPYRAIGYITNSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR 60

Query: 337 ALASYRNYTFAAYGNDIAVY 396
           ALASYR YTFAAYG+DIAV+
Sbjct: 61  ALASYREYTFAAYGSDIAVF 80


>ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/80 (90%), Positives = 79/80 (98%)
 Frame = +1

Query: 157 MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 336
           MGIFEP+RAIGYIT++VPFSVQRLGTETFVTVSVGKA+Q+YNCAKLNLVLVGPQLPKKIR
Sbjct: 1   MGIFEPYRAIGYITNSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR 60

Query: 337 ALASYRNYTFAAYGNDIAVY 396
           ALASYR YTFAAYG+DIAV+
Sbjct: 61  ALASYREYTFAAYGSDIAVF 80


>ref|XP_002874820.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320657|gb|EFH51079.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 911

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/80 (90%), Positives = 79/80 (98%)
 Frame = +1

Query: 157 MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 336
           MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKA+QIYNCAKLNLV++ PQLPKKIR
Sbjct: 1   MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR 60

Query: 337 ALASYRNYTFAAYGNDIAVY 396
           ALASYR+YTFAA+GN+IAV+
Sbjct: 61  ALASYRDYTFAAFGNEIAVF 80


>ref|NP_567275.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|16604679|gb|AAL24132.1| putative WD-repeat membrane
           protein [Arabidopsis thaliana]
           gi|20465603|gb|AAM20284.1| putative WD-repeat membrane
           protein [Arabidopsis thaliana]
           gi|332657045|gb|AEE82445.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 910

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/80 (88%), Positives = 78/80 (97%)
 Frame = +1

Query: 157 MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 336
           MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKA+QIYNCAKLNLV++ PQLPKKIR
Sbjct: 1   MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR 60

Query: 337 ALASYRNYTFAAYGNDIAVY 396
           ALASYR+YTF A+GN+IAV+
Sbjct: 61  ALASYRDYTFVAFGNEIAVF 80


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