BLASTX nr result

ID: Panax21_contig00037536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037536
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [S...    56   3e-06
dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06

>ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [Sorghum bicolor]
           gi|241916157|gb|EER89301.1| hypothetical protein
           SORBIDRAFT_10g005066 [Sorghum bicolor]
          Length = 553

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
 Frame = +1

Query: 16  STVTEIELRKIRTRYQIPDTHQVRAPGSNERMYQR-PTGWMAIPVTLLEKGVRFPLHIFL 192
           S++T+ EL  I ++Y +P+ +    P  ++R     P G + +    LE G+R PLH F 
Sbjct: 43  SSLTQEELDAICSKYGVPEQYSAVLPAGHQRACSPLPPGAICVNEHALEAGMRVPLHAFF 102

Query: 193 VTLLGFVGVGFA*LVPNSYIHILAFIAFCHKVRVEPTLDFF 315
             +L   GV    + PN +  +  FI   HK  V P+L  F
Sbjct: 103 CEVLAHFGVAPIQIAPNGWRAMAGFIVLSHKAGVAPSLPVF 143


>dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
 Frame = +1

Query: 1   HANTPSTVTEIE--LRKIRT---------RYQIPDTHQVRAPGSNERMYQRPTGWMAIPV 147
           HA  PS  T+ E  +  +RT         +Y +P     R  G        P G + +  
Sbjct: 23  HAAVPSRDTDAEAFVSSLRTQDEVDALCDKYGVPKEFTARPAGDLRANSTPPPGAICVYA 82

Query: 148 TLLEKGVRFPLHIFLVTLLGFVGVGFA*LVPNSYIHILAFIAFCHKVRVEPTL----DFF 315
             LE G+R PL  F   +L   G+  A L PN +  +  F+A C    V P+L     FF
Sbjct: 83  RSLEAGMRLPLQGFFSDVLAHFGIAPAQLTPNGWRAMAGFLALCDYAGVPPSLAVFRRFF 142

Query: 316 TIYKIGQTREKGFKALSKQAPKTGEKFERRSLVSTPSSN 432
            +  + Q  EKG+     +   +G +F  R L+  P SN
Sbjct: 143 VMCSLSQEHEKGWYLFRPRRDSSGLRF--RGLLK-PDSN 178


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