BLASTX nr result

ID: Panax21_contig00037498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037498
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522456.1| mads box protein, putative [Ricinus communis...    86   3e-15
ref|XP_002311308.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]    84   2e-14
ref|XP_002316130.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor ...    77   2e-12

>ref|XP_002522456.1| mads box protein, putative [Ricinus communis]
           gi|223538341|gb|EEF39948.1| mads box protein, putative
           [Ricinus communis]
          Length = 360

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
 Frame = -2

Query: 516 NLVPLRDSDCSAGTSLESYSGLLNASEMVQQDDFLTGLNRNGA-SSLQLNAQFNLQVHEQ 340
           NL+P RD +CSA +S  SYSG     +  +  +       NG  + L   A   LQ+  Q
Sbjct: 221 NLLPHRDVECSASSSFGSYSGYFGTGKSSELSNSSQENGLNGILNELNGTASLRLQLAGQ 280

Query: 339 QSFPSYNFDLLNDGYIQPTEQMKMQENVLDFLLDRKYEVPQSGYDPLHHSWVSASSGTCG 160
                YN ++LND   QP   M +QE+ +DF ++  +EVP+ GYD    SW S SSG C 
Sbjct: 281 YPHLPYNLNMLNDTKFQPAADMNIQESPVDFHVNGSFEVPKPGYDTTPGSWAS-SSGPCA 339

Query: 159 SAMFEEHLFPQV 124
             MF+E L+ ++
Sbjct: 340 VTMFDEQLYSRI 351


>ref|XP_002311308.1| predicted protein [Populus trichocarpa] gi|222851128|gb|EEE88675.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
 Frame = -2

Query: 516 NLVPLRDSDCSAGTSLESYSGLLNASEMVQQDDFLTGLNRNGASSLQLNAQFNLQVHEQQ 337
           NL+P RD++CSA TS  SYSG   A +  +          NG    + N   +L++    
Sbjct: 222 NLLPHRDAECSATTSFGSYSGYFGAGKNSELSSSGQESGMNGILD-EFNGTASLRLQMAG 280

Query: 336 SFP----SYNFDLLNDGYIQPTEQMKMQENVLDFLLDRKYEVPQSGYDPLHHSWVSASSG 169
            +P    SYN +LLND   QP  +MK Q++  DF ++  +E P+ GYD     W S + G
Sbjct: 281 QYPYLPGSYNLNLLNDSKFQPAAEMKTQKSPEDFHVNGSFEAPKPGYDSTPCGWAS-TPG 339

Query: 168 TCGSAMFEEHLFPQ 127
           +C   MF++HL+ Q
Sbjct: 340 SCAVTMFDDHLYSQ 353


>emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]
          Length = 465

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
 Frame = -2

Query: 510 VPLRDSDCSAGTSLESYSGLLNASEMV------QQDDFLTGLNRNGASSLQLNAQFNLQV 349
           +P RD +CSA  S+  YSG  +  +        Q D+   G   +  + L  N+   LQ+
Sbjct: 298 LPQRDMECSADASIPGYSGYYSTGKQTEIGNSGQVDE--QGQEGSALNQLSGNSNLRLQL 355

Query: 348 HEQQSF-PSYNFDLLNDGYIQPTEQMKMQENVLDFLLDRKYEVPQSGYDPLHHSWVSASS 172
            EQ  + P  N +L ++  ++P  +M +Q N +D+ ++  +E+P   YD   H+WVSA S
Sbjct: 356 SEQYLYSPFGNMNLPDEKKLKPEMEMNLQGNPVDYQVNGNFEIPAPIYDNRQHTWVSA-S 414

Query: 171 GTCGSAMFEEHLF------PQVHCSFDEHEMKELDHHMFLKAAPHSSLI 43
           G C  AMF+E+ F      P VH +F +  +  ++HH ++    ++++I
Sbjct: 415 GPCSIAMFDENSFSQGNVPPIVHSAFPDSLLAYINHHNYVSIFAYAAII 463


>ref|XP_002316130.1| predicted protein [Populus trichocarpa] gi|222865170|gb|EEF02301.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
 Frame = -2

Query: 516 NLVPLRDSDCSAGTSLESYSGLLNASEMVQQDDFLTGLNRNGASSLQLNAQFNLQVHEQQ 337
           NL+P RD++C+A TS  SYSG   A +  +          NG    +LN   +L++    
Sbjct: 205 NLLPHRDAECTASTSFGSYSGYFGAGKNSELSSSGQESGMNGILD-ELNGTASLRLRLAG 263

Query: 336 SFP----SYNFDLLNDGYIQPTEQMKMQENVLDFLLDRKYEVPQSGYDPLHHSWVSASSG 169
            +P     YN +LLND   QP  +M +Q+   DF +   +E P+  YD   H W S +SG
Sbjct: 264 QYPYLPGPYNLNLLNDTKFQPAAEMNIQKGPGDFNVSGSFEAPKPEYDSGPHGWAS-TSG 322

Query: 168 TCGSAMFEEHLF 133
           +C   MF++HL+
Sbjct: 323 SCAVTMFDDHLY 334


>ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor 2A homolog [Vitis
           vinifera] gi|297733964|emb|CBI15211.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
 Frame = -2

Query: 510 VPLRDSDCSAGTSLESYSGLLNASEMV------QQDDFLTGLNRNGASSLQLNAQFNLQV 349
           +P RD +CSA  S+  YSG  +  +        Q D+   G   +  + L  N+   LQ+
Sbjct: 224 LPQRDMECSADASIPGYSGYYSTGKQTEIGNSGQVDE--QGQEGSALNQLSGNSNLRLQL 281

Query: 348 HEQQSF-PSYNFDLLNDGYIQPTEQMKMQENVLDFLLDRKYEVPQSGYDPLHHSWVSASS 172
            EQ  + P  N +L ++  ++P  +M +Q N +D+ ++  +E+P   YD   H+WVSA S
Sbjct: 282 SEQYLYSPFGNLNLPDEKKLKPEMEMNLQGNPVDYQVNGNFEIPAPIYDNRQHTWVSA-S 340

Query: 171 GTCGSAMFEEHLF------PQVHCSFDEHEMKEL 88
           G C  AMF+E+ F      P VH +F + +   L
Sbjct: 341 GPCSIAMFDENSFSQGNVPPIVHSAFPDSQQNSL 374


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