BLASTX nr result

ID: Panax21_contig00037461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037461
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16176.3| unnamed protein product [Vitis vinifera]              237   6e-61
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...   237   6e-61
ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat...   217   9e-55
ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase fa...   214   8e-54

>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  237 bits (605), Expect = 6e-61
 Identities = 113/167 (67%), Positives = 139/167 (83%)
 Frame = +3

Query: 3   LRFFNFLGLHKNFTHSTASFCILIHSLVHSNLFWPASSILHTLLLRTSDPRLLFESFMNS 182
           LRFFNFLGLHKNF HST SFCILIH+LV SNL+WPASS+L TLLLR  +P  LFESF++S
Sbjct: 77  LRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDS 136

Query: 183 YKCCDFSSSLGFDLLIQAYLPNRRVLDSVLIVKLMKECKLMPEVRTFSAVLNGLIRIRRF 362
           Y+ C+FS++LGFDLLIQ Y+ NRR LD +++V+LM +C ++P++RT S VLNGLIRIR+F
Sbjct: 137 YRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQF 196

Query: 363 DMVLALFDEIVGLGIQPDAYLYNAVIRSLCELKDFDRVNEMIHRMES 503
            M L LFDEIV  G++PD Y+Y AV+RSLCELKDF R  E+I RMES
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMES 243


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  237 bits (605), Expect = 6e-61
 Identities = 113/167 (67%), Positives = 139/167 (83%)
 Frame = +3

Query: 3   LRFFNFLGLHKNFTHSTASFCILIHSLVHSNLFWPASSILHTLLLRTSDPRLLFESFMNS 182
           LRFFNFLGLHKNF HST SFCILIH+LV SNL+WPASS+L TLLLR  +P  LFESF++S
Sbjct: 77  LRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDS 136

Query: 183 YKCCDFSSSLGFDLLIQAYLPNRRVLDSVLIVKLMKECKLMPEVRTFSAVLNGLIRIRRF 362
           Y+ C+FS++LGFDLLIQ Y+ NRR LD +++V+LM +C ++P++RT S VLNGLIRIR+F
Sbjct: 137 YRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQF 196

Query: 363 DMVLALFDEIVGLGIQPDAYLYNAVIRSLCELKDFDRVNEMIHRMES 503
            M L LFDEIV  G++PD Y+Y AV+RSLCELKDF R  E+I RMES
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMES 243


>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  230 bits (586), Expect = 1e-58
 Identities = 112/168 (66%), Positives = 138/168 (82%), Gaps = 1/168 (0%)
 Frame = +3

Query: 3   LRFFNFLGLHKNFTHSTASFCILIHSLVHSNLFWPASSILHTLLLRTS-DPRLLFESFMN 179
           LRFFNFLGLHKNF HST SFCILIH+LV++NLFWPASS+L TLLLR   DPR +FE+ ++
Sbjct: 89  LRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLD 148

Query: 180 SYKCCDFSSSLGFDLLIQAYLPNRRVLDSVLIVKLMKECKLMPEVRTFSAVLNGLIRIRR 359
            ++ CDF SSLGFDLLIQ+Y+  +R+ DSVLI +LM++C+LMP+VRT   VLNGL +IRR
Sbjct: 149 CFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRR 208

Query: 360 FDMVLALFDEIVGLGIQPDAYLYNAVIRSLCELKDFDRVNEMIHRMES 503
            DMVL LF EI+ +GI+PD Y+Y AVIRS CELK+F +  EMI RMES
Sbjct: 209 VDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMES 256


>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
           gi|449501214|ref|XP_004161309.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  217 bits (552), Expect = 9e-55
 Identities = 103/166 (62%), Positives = 131/166 (78%)
 Frame = +3

Query: 3   LRFFNFLGLHKNFTHSTASFCILIHSLVHSNLFWPASSILHTLLLRTSDPRLLFESFMNS 182
           LRFFNFLGLH+NF HSTASFCILIHSL+ +NLFWPASS+L TLLLR  +P  +FE+F  S
Sbjct: 87  LRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFES 146

Query: 183 YKCCDFSSSLGFDLLIQAYLPNRRVLDSVLIVKLMKECKLMPEVRTFSAVLNGLIRIRRF 362
           YK   FSSS GFD+LIQ Y+ N+RV+D VL+V LM++  L+PEVRT SA+LN L RIR+F
Sbjct: 147 YKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKF 206

Query: 363 DMVLALFDEIVGLGIQPDAYLYNAVIRSLCELKDFDRVNEMIHRME 500
             VL LFD +V  G++PD Y+Y  V++ LCELKDF++  E+I++ E
Sbjct: 207 RQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE 252


>ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
           gi|355508324|gb|AES89466.1|
           UDP-glucoronosyl/UDP-glucosyl transferase family
           protein-like protein [Medicago truncatula]
          Length = 970

 Score =  214 bits (544), Expect = 8e-54
 Identities = 103/167 (61%), Positives = 130/167 (77%)
 Frame = +3

Query: 3   LRFFNFLGLHKNFTHSTASFCILIHSLVHSNLFWPASSILHTLLLRTSDPRLLFESFMNS 182
           LRFFNFLGLHKN  H+T SF IL+H+LV + LFWPA+S+LHTLLLR SDP+ +FE F+ S
Sbjct: 80  LRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLES 139

Query: 183 YKCCDFSSSLGFDLLIQAYLPNRRVLDSVLIVKLMKECKLMPEVRTFSAVLNGLIRIRRF 362
           +K C FSS+LGFD L+ +YL N RV D+V++++LM    L+PEVRT SA+LNGL+RIR+F
Sbjct: 140 HKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKF 199

Query: 363 DMVLALFDEIVGLGIQPDAYLYNAVIRSLCELKDFDRVNEMIHRMES 503
            +V  +FDE V  G++PD Y  +AVIRSLCELKDF R  E I  MES
Sbjct: 200 ILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMES 246


Top