BLASTX nr result

ID: Panax21_contig00037446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037446
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]    93   6e-17
emb|CBI19167.3| unnamed protein product [Vitis vinifera]               77   5e-12
ref|XP_002302301.1| methyl binding domain protein [Populus trich...    76   8e-12
ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248...    75   1e-11
ref|XP_003547086.1| PREDICTED: uncharacterized protein LOC100820...    75   1e-11

>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 79/228 (34%), Positives = 103/228 (45%), Gaps = 17/228 (7%)
 Frame = +1

Query: 94  KLESLTYIDLSKLSQSELQALSLCSDSAFHLQPTHDDVVVPQINPSLFNESAGTRRQTYS 273
           KL+SL  ID S LSQS+L  LSL S     LQ  +D VVVP+I+ +LFNESAG+RRQTYS
Sbjct: 12  KLDSLKQIDASSLSQSDLYQLSLSSFHPSLLQ--NDAVVVPKIDRTLFNESAGSRRQTYS 69

Query: 274 RL--------HRRRVCSSSAAGGHPPLAGNLPSDSTNAENLLIVNHLKKLLGQNENSNSK 429
           R+         RRR+     A   PP A +   D   +EN LI+++LK L+G  EN +S 
Sbjct: 70  RICLAPRKPRSRRRLAGLLPAPKPPPSAAH--CDPEQSENKLIIHYLKSLIGGEENPSSH 127

Query: 430 XXXXXXXXXXXXXXXD--AIVVEDSNEXXXXXXXXXXXXFLK------DGNGVELLK-VN 582
                             A+VV                   K      +G G   L+ VN
Sbjct: 128 DLALVVSEERNHGSQSELAMVVAGGGSELGEIVEKGKRGRKKRIVAAGEGGGQRPLQIVN 187

Query: 583 QNGALVDFAELGNADEFYSGAXXXXXXXXXXXXXXXXXXXXXDGQWCS 726
           +NG +VD   L +A++ Y                        DGQWCS
Sbjct: 188 RNGEVVDLEALASAEDPYGDELKRRTVGLDREEEILGVLRGLDGQWCS 235


>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 64/192 (33%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
 Frame = +1

Query: 97  LESLTYIDLSKLSQSELQALSLCSDSAFHLQPTHDDVVVPQINPSLFNESAGTRRQTYSR 276
           LE+L  IDL  LSQSELQALSL S  +  L+   DDVV+P+I+ S+FNESAG+R+QTYSR
Sbjct: 16  LEALPLIDLRFLSQSELQALSLTSSHSSDLRRC-DDVVIPKIDRSIFNESAGSRKQTYSR 74

Query: 277 LHRRRVCSSSAAGGHPPLAGNLPS--------------DSTNAENLLIVNHLKKLLGQNE 414
           L          A   P +A  +P               +  + EN LI+  LK L     
Sbjct: 75  LR--------LAPRKPDIAATIPRRPRFSPHLNQKAALEPVDEENTLIIGLLKGLFATET 126

Query: 415 NSNSKXXXXXXXXXXXXXXXDAIVVEDSNEXXXXXXXXXXXXFLKDGNGVELLKVNQNGA 594
           +++                 D I V+                + + G G  +  +N NG 
Sbjct: 127 HAD-----------------DLIPVQ--------------VEYRESGEGGGMGIINNNGV 155

Query: 595 LVDFAELGNADE 630
           +VD A L NA++
Sbjct: 156 VVDVAALANAED 167


>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
           gi|222844027|gb|EEE81574.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1276

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
 Frame = +1

Query: 97  LESLTYIDLSKLSQSELQALSLCSDSAFHLQPTHDDVVVPQINPSLFNESAGTRRQTYSR 276
           +ESL  IDL  LSQSEL +LS CS S   L+    DV  P+I+ S+FNESAG+R+QT+SR
Sbjct: 19  IESLPLIDLRHLSQSELLSLSFCSSSPHRLRTDTADVSTPKIDRSVFNESAGSRKQTFSR 78

Query: 277 LH-RRRVCSSSAAGGHPPLA--GNLPSDSTNAENLLIVNHLKKLLGQNENS 420
           L    R  ++S +    P+    N      + EN  I++ LK L G + NS
Sbjct: 79  LRLAPRNNNASPSSNSTPVVPFQNTERQPLDEENSQIISLLKSLFGSDSNS 129


>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
          Length = 947

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
 Frame = +1

Query: 97  LESLTYIDLSKLSQSELQALSLCSDSAFHLQPTHDDVVVPQINPSLFNESAGTRRQTYSR 276
           LE+L  IDL  LSQSELQALSL S  +  L+   DDVV+P+I+ S+FNESAG+R+QTYSR
Sbjct: 14  LEALPLIDLRFLSQSELQALSLTSSHSSDLRRC-DDVVIPKIDRSIFNESAGSRKQTYSR 72

Query: 277 LHRRRVCSSSAAGGHPPLAGNLPS--------------DSTNAENLLIVNHLKKLLGQNE 414
           L          A   P +A  +P               +  + EN LI+  LK L     
Sbjct: 73  LR--------LAPRKPDIAATIPRRPRFSPHLNQKAALEPVDEENTLIIGLLKGLFATET 124

Query: 415 NSNSKXXXXXXXXXXXXXXXDAI---VVEDSNEXXXXXXXXXXXXFL-----KDGNGVEL 570
           +++                   I   VV DS                       G G  +
Sbjct: 125 HADDLIPVQVEYRESSNEILQNIPIDVVADSGRKRKRGRPKSEKTIAVYQNGGSGEGGGM 184

Query: 571 LKVNQNGALVDFAELGNADE 630
             +N NG +VD A L NA++
Sbjct: 185 GIINNNGVVVDVAALANAED 204


>ref|XP_003547086.1| PREDICTED: uncharacterized protein LOC100820612 [Glycine max]
          Length = 443

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
 Frame = +1

Query: 94  KLESLTYIDLSKLSQSELQALSLCSDSAFHLQPTHDDVVVPQINPSLFNESAGTRRQTYS 273
           KLESL  ID + LS SEL ALSL S  + H      D++ P+I+P+LFN+S G+ RQTYS
Sbjct: 6   KLESLACIDSTTLSHSELLALSLSSLCSTH------DLLTPKIDPALFNQSTGSHRQTYS 59

Query: 274 RLH------RRRVCSSSAAGGHPPLAGNLPSDSTNAENLLIVNHLKKLLGQNEN 417
             H      RRR+     +   PPL  +   D  NAEN LI+++LK+ +  + N
Sbjct: 60  LPHSSPTARRRRLAGLLPSPKLPPLPAH---DPENAENRLIIDYLKQFIRDDPN 110


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