BLASTX nr result

ID: Panax21_contig00037444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037444
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...    91   2e-16
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]    91   2e-16
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821...    60   4e-07

>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 76/218 (34%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
 Frame = -3

Query: 637 KLLDISVEAPQTEE---HISAESPSCLSVLKTYAEPQSKPISIPTTNQRTLLNLSPPSKR 467
           KLLDI VEA    +    +   SP      KT AE Q + + I    Q+  L+LS PS+R
Sbjct: 360 KLLDIGVEACSNLDASVKVVGCSPMMEGSSKTCAESQLQLVKISAATQKEQLDLSTPSER 419

Query: 466 P-VTLFGRARLGLSDSDVFHEQNERISINDDPPHSVSTKIEQDNLHIVGRVMYGLQDSAL 290
           P +TLFG+AR G  DS   HEQ + + +  DP   V+ + E ++           QD   
Sbjct: 420 PPLTLFGKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENES---------SSQD--- 467

Query: 289 KEKEFVNGEPLHSVYKKGDSYSSFEKVDIVEEACDKSRENKKTDEDIIK-PEYKSTKIMT 113
                                        VE  C+ S E KK + D+ + P  K  +  T
Sbjct: 468 -----------------------------VELECENSLE-KKIEVDVTEVPSEKLVEKET 497

Query: 112 QTGK-ASSSPIGSSKRFSVNLRNFYRSMNVPVPQPLPS 2
           +  K AS +PI  S+ F+ +LRN YRSMNV VPQPLPS
Sbjct: 498 EVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPS 535


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 76/218 (34%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
 Frame = -3

Query: 637  KLLDISVEAPQTEE---HISAESPSCLSVLKTYAEPQSKPISIPTTNQRTLLNLSPPSKR 467
            KLLDI VEA    +    +   SP      KT AE Q + + I    Q+  L+LS PS+R
Sbjct: 874  KLLDIGVEACSNLDASVKVVGCSPMMEGSSKTCAESQLQLVKISAATQKEQLDLSTPSER 933

Query: 466  P-VTLFGRARLGLSDSDVFHEQNERISINDDPPHSVSTKIEQDNLHIVGRVMYGLQDSAL 290
            P +TLFG+AR G  DS   HEQ + + +  DP   V+ + E ++           QD   
Sbjct: 934  PPLTLFGKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENES---------SSQD--- 981

Query: 289  KEKEFVNGEPLHSVYKKGDSYSSFEKVDIVEEACDKSRENKKTDEDIIK-PEYKSTKIMT 113
                                         VE  C+ S E KK + D+ + P  K  +  T
Sbjct: 982  -----------------------------VELECENSLE-KKIEVDVTEVPSEKLVEKET 1011

Query: 112  QTGK-ASSSPIGSSKRFSVNLRNFYRSMNVPVPQPLPS 2
            +  K AS +PI  S+ F+ +LRN YRSMNV VPQPLPS
Sbjct: 1012 EVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPS 1049


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 73/223 (32%), Positives = 95/223 (42%), Gaps = 11/223 (4%)
 Frame = -3

Query: 637 KLLDISVEAPQTEEHISAESPSCLSV----LKTYAEPQSKPISIPTTNQRTLLNLSPPSK 470
           KLLDI+VEA  +E  ++A      SV    ++  A+ QS P+ + +   R LL+LSPPSK
Sbjct: 360 KLLDINVEA-SSETEVTARVLDYPSVVEQPIQISAQSQSSPVKVTS---RRLLSLSPPSK 415

Query: 469 RP-VTLFGRARLGLSDSDVFHEQNERISINDDPPHSVSTKIEQDNLHIVGRVMYGLQDSA 293
           RP VTLF                                          GR   G+ DS 
Sbjct: 416 RPEVTLF------------------------------------------GRARLGIPDSV 433

Query: 292 LKEKEFVNGEPLHSVYKKGDSYSSFEKVDIVEEACDKSRENKKTDEDIIKPEYKSTKIMT 113
           +  K               D   SFE    VE  C+   E+K   E   + +  +TK   
Sbjct: 434 VAHKM--------------DQDVSFENE--VEVKCENILESKLDTELKCENKLDTTKQCG 477

Query: 112 QTGKAS------SSPIGSSKRFSVNLRNFYRSMNVPVPQPLPS 2
           ++ K         SPIGSS+ FS  LR  YRSMNVPVP+PLPS
Sbjct: 478 ESVKKEVLKFSVRSPIGSSQNFSETLRKLYRSMNVPVPRPLPS 520


>ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821385 [Brachypodium
           distachyon]
          Length = 622

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
 Frame = -3

Query: 484 SPPSKRP-VTLFGRARLGLSDSDVFHEQNERISINDDPPHSVSTKIEQDNLHIVGRVMYG 308
           SPP + P +TLFGRAR G    D+  E+     I+D+    +    +  ++HI G   Y 
Sbjct: 413 SPPVQEPEITLFGRARFGSQAIDIMEEELRHQYISDEETR-LCAPTDLVHVHIEGVATYS 471

Query: 307 LQDSALKEKEFVNGEPLHSVYKKGDSYSSFE--KVDIVEEACDKSR-----------ENK 167
             +   ++      +P  +    GD   S +     IV EA +              +  
Sbjct: 472 GVNLITEQPPASQEDPTEA----GDEVPSSQCNAAPIVPEAFEVQPLPTIQLNVSVPDQP 527

Query: 166 KTDEDIIKP------EYKSTKIMTQTGKASSSP-----IGSSKRFSVNLRNFYRSMNVPV 20
           +  E II+P      E  S ++++   K +        IGSSK F+ +L+  YRS N+PV
Sbjct: 528 EKSETIIEPKSISDTESSSLRVVSSAEKTNCQMDLPCVIGSSKSFNPSLKRLYRSRNIPV 587

Query: 19  PQPLPS 2
           P+PLPS
Sbjct: 588 PRPLPS 593


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