BLASTX nr result

ID: Panax21_contig00037424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037424
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   116   2e-24
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              116   2e-24
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]   116   2e-24
ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat...   108   4e-22
ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat...    89   5e-16

>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  116 bits (290), Expect = 2e-24
 Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
 Frame = +2

Query: 26   SSKRLILIP--PYLFHYSVTLHQQAQIELTQGFPTHNQILDFFNYLLXXXXXXXXXXXXX 199
            SS+RLI I   P L      +H Q           +N +LDFFN LL             
Sbjct: 843  SSRRLISISFLPNLSRSISIIHHQP----------NNDVLDFFNDLLQQCSKSHLSQQIH 892

Query: 200  XXXLLHASWASAFLAAGLISSYGRLGGLNDARKVFDTMPMECISNLLLWNSILRANAANG 379
               ++  S  SAFLAA ++S Y   G ++DA++VF+  P+EC SNLLLWNSILRAN A+G
Sbjct: 893  SQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHG 952

Query: 380  EFKETLMLYLRMRNYGIWADGFTFPLVVRASA 475
              +E L +Y RMR  G+ ADGFTFPLV+RA A
Sbjct: 953  YCEEALEIYCRMRKLGVSADGFTFPLVIRACA 984


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  116 bits (290), Expect = 2e-24
 Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
 Frame = +2

Query: 26  SSKRLILIP--PYLFHYSVTLHQQAQIELTQGFPTHNQILDFFNYLLXXXXXXXXXXXXX 199
           SS+RLI I   P L      +H Q           +N +LDFFN LL             
Sbjct: 5   SSRRLISISFLPNLSRSISIIHHQP----------NNDVLDFFNDLLQQCSKSHLSQQIH 54

Query: 200 XXXLLHASWASAFLAAGLISSYGRLGGLNDARKVFDTMPMECISNLLLWNSILRANAANG 379
              ++  S  SAFLAA ++S Y   G ++DA++VF+  P+EC SNLLLWNSILRAN A+G
Sbjct: 55  SQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHG 114

Query: 380 EFKETLMLYLRMRNYGIWADGFTFPLVVRASA 475
             +E L +Y RMR  G+ ADGFTFPLV+RA A
Sbjct: 115 YCEEALEIYCRMRKLGVSADGFTFPLVIRACA 146


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  116 bits (290), Expect = 2e-24
 Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
 Frame = +2

Query: 26  SSKRLILIP--PYLFHYSVTLHQQAQIELTQGFPTHNQILDFFNYLLXXXXXXXXXXXXX 199
           SS+RLI I   P L      +H Q           +N +LDFFN LL             
Sbjct: 5   SSRRLISISFLPNLSRSISIIHHQP----------NNDVLDFFNDLLQQCSKSHLSQQIH 54

Query: 200 XXXLLHASWASAFLAAGLISSYGRLGGLNDARKVFDTMPMECISNLLLWNSILRANAANG 379
              ++  S  SAFLAA ++S Y   G ++DA++VF+  P+EC SNLLLWNSILRAN A+G
Sbjct: 55  SQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHG 114

Query: 380 EFKETLMLYLRMRNYGIWADGFTFPLVVRASA 475
             +E L +Y RMR  G+ ADGFTFPLV+RA A
Sbjct: 115 YCEEALEIYCRMRKLGVSADGFTFPLVIRACA 146


>ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
           gi|449522932|ref|XP_004168479.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score =  108 bits (270), Expect = 4e-22
 Identities = 59/136 (43%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
 Frame = +2

Query: 71  SVTLHQQ-AQIELTQGFPTHNQILDFFNYLLXXXXXXXXXXXXXXXXLLHASWASAFLAA 247
           S+  H Q + I   +  P      DFF++LL                ++  ++ SAF++A
Sbjct: 21  SINFHSQFSSITYDEDLP------DFFDHLLRQCNGIQHSKQVHSATVVTGAYCSAFVSA 74

Query: 248 GLISSYGRLGGLNDARKVFDTMPMECISNLLLWNSILRANAANGEFKETLMLYLRMRNYG 427
            L+S Y R G ++DARKVF + P EC SN LLWNSI+RAN  +G   E L LY +MRNYG
Sbjct: 75  RLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYG 134

Query: 428 IWADGFTFPLVVRASA 475
           +  DGFTFPL++RAS+
Sbjct: 135 VLGDGFTFPLLLRASS 150


>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/78 (55%), Positives = 55/78 (70%)
 Frame = +2

Query: 236 FLAAGLISSYGRLGGLNDARKVFDTMPMECISNLLLWNSILRANAANGEFKETLMLYLRM 415
           FLAA LI+ Y R   L+ ARKVFD +P+E + +LLLWNSI+RAN ++G  +  L LY+ M
Sbjct: 64  FLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEM 123

Query: 416 RNYGIWADGFTFPLVVRA 469
           R  G   DGFT PLV+RA
Sbjct: 124 RKLGFLPDGFTLPLVIRA 141


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