BLASTX nr result

ID: Panax21_contig00037411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037411
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At...    86   4e-15
emb|CAN62071.1| hypothetical protein VITISV_036193 [Vitis vinifera]    84   1e-14
ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At4g02110-like [Vitis
           vinifera]
          Length = 1314

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
 Frame = +1

Query: 22  AFRNVSCVELVKSCDRTTVPAAIENGLASTS-GSERSPHSDASKLSPNSYSRKTPRETTP 198
           A ++ +C EL ++CDRT V A + NGLA  S  +++SPHS+  KL+  SYSRKTPR  + 
Sbjct: 302 ATKDTACGELSENCDRTPVSANLRNGLALPSISAKKSPHSE-EKLNILSYSRKTPRRNSL 360

Query: 199 TMYSGEMTDNLNTALTVNAGKLNVS-RFDIS-SMTEQPKDGTKSD-LKIPKEIVS--HHE 363
               GE + N   +  ++   L V+  F+IS S  E+ K+G  SD +K P +     H E
Sbjct: 361 PTCLGENSSNATGSPKLDIVTLKVNGSFNISPSRVEEAKNGADSDSVKTPSKGTKQPHEE 420

Query: 364 EQSSKLDEKQKMDVSCGSSKSQKAGQ 441
             S  L +K+K DVSC  SKSQK  Q
Sbjct: 421 SLSEVLPQKRKTDVSCAISKSQKRRQ 446


>emb|CAN62071.1| hypothetical protein VITISV_036193 [Vitis vinifera]
          Length = 1391

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 59/143 (41%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
 Frame = +1

Query: 22  AFRNVSCVELVKSCDRTTVPAAIENGLASTS-GSERSPHSDASKLSPNSYSRKTPRETTP 198
           A ++ +C EL ++CDRT V A + NGLA  S  +++SPHS+  KL+  SYSRKTPR  + 
Sbjct: 302 ATKDTACGELSENCDRTPVSANLRNGLALPSISAKKSPHSE-EKLNILSYSRKTPRRNSL 360

Query: 199 TMYSGEMTDNLNTALTVNAGKLNVS-RFDIS-SMTEQPKDGTKSDLKIPKEIVSHHEEQS 372
               GE + N   +  ++   L V+  F+IS S  E+ K+GTK           H E  S
Sbjct: 361 PTCLGENSSNATGSPKLDIVTLKVNGSFNISPSRVEEAKNGTKQ---------PHEESLS 411

Query: 373 SKLDEKQKMDVSCGSSKSQKAGQ 441
             L +K+K DVSC  SKSQK  Q
Sbjct: 412 EVLPQKRKTDVSCAISKSQKRRQ 434


>ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|222861753|gb|EEE99295.1|
           predicted protein [Populus trichocarpa]
          Length = 1282

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
 Frame = +1

Query: 13  DARAFRNVSCVELVKSCDRTTVPAAIENGLASTSGS-ERSPHSDASKLSPNSYSRKTPRE 189
           D   F+  +  +L  +  RT +       L   S S ER  HSDA K S  SY+R+TP+ 
Sbjct: 341 DVGGFKGATSNDLPGTQGRTPLSTRTSKDLEFISRSVERPSHSDA-KYSTTSYTRRTPQI 399

Query: 190 TTPTMYSGEMTDNLNTALTVNAGKLNVSRFDISSMTEQPKDGTK-SDLKIPKEIVS--HH 360
           +  +++SG   +   +   +    +N+S    S+  E  KD T  S  +IP++ +   + 
Sbjct: 400 SPSSIFSGNSGNIRGSPKVLLGESINMS----SAKAEYAKDTTSPSCAEIPRKGIELLYE 455

Query: 361 EEQSSKLDEKQKMDVSCGSSKSQK 432
           E   SK   KQK DVSC SSKSQK
Sbjct: 456 EAPGSK---KQKTDVSCSSSKSQK 476