BLASTX nr result

ID: Panax21_contig00037402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037402
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312325.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002278781.1| PREDICTED: probable ubiquitin-conjugating en...   120   2e-25
ref|XP_003550562.1| PREDICTED: probable ubiquitin-conjugating en...   115   3e-24
ref|XP_002519241.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_003550560.1| PREDICTED: probable ubiquitin-conjugating en...   109   3e-22

>ref|XP_002312325.1| predicted protein [Populus trichocarpa] gi|222852145|gb|EEE89692.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  120 bits (302), Expect = 9e-26
 Identities = 68/133 (51%), Positives = 84/133 (63%), Gaps = 8/133 (6%)
 Frame = +2

Query: 5   LVLNEKPFFNEP---IYTGMNRKLFDKMSRDYNNNVFVLSCKTMMFLLRNPPKNFEGFVV 175
           LVLNEKP++NEP   +  G  R +++K S  Y+ NVF LSCKTM+FLLR PPKNFEGFV 
Sbjct: 196 LVLNEKPYYNEPGNGVLPG--RAIWEKKSNAYSENVFFLSCKTMLFLLRRPPKNFEGFVA 253

Query: 176 EHFRNRGRAILTACKAYTNGFVRVGDYQDSGVFL---PERVKVSKKF--LMNVQYPLLVQ 340
            HFR +   IL+AC AY NG  RVG Y++ G         V VS KF  LM   YP L+ 
Sbjct: 254 SHFREKASVILSACNAYINGQTRVGYYRNDGSCSSGNSSTVDVSDKFKGLMGQLYPELLL 313

Query: 341 AFSKNDSSLKEFL 379
            F +N +SL  F+
Sbjct: 314 GFKRNGASLGNFV 326


>ref|XP_002278781.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Vitis
           vinifera]
          Length = 362

 Score =  120 bits (300), Expect = 2e-25
 Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 9/148 (6%)
 Frame = +2

Query: 2   GLVLNEKPFFNEPIYTGM-NRKLFDKMSRDYNNNVFVLSCKTMMFLLRNPPKNFEGFVVE 178
           GLVLNEKP+FNEP +  +  R L++K S  Y+  VF LSCKTM+F+LR PPKNFE  +  
Sbjct: 168 GLVLNEKPYFNEPGHGVLPGRSLWEKNSMAYSETVFALSCKTMLFMLRKPPKNFEALIAA 227

Query: 179 HFRNRGRAILTACKAYTNGFVRVGDYQDSG------VFLPERVKVSKKFLMNVQ--YPLL 334
           HFR+R   IL AC AYT+G V+VG Y+  G            V VS  F  ++Q  +P L
Sbjct: 228 HFRDRALFILEACNAYTDGRVKVGYYRGDGSSSSSSSSSSSTVHVSHTFKTSMQKVFPDL 287

Query: 335 VQAFSKNDSSLKEFLVQLNQMMKKIEDE 418
           V  F++N +SL  F+ Q+ Q  KK   +
Sbjct: 288 VHTFTRNGASLGNFVEQVKQDRKKASSQ 315


>ref|XP_003550562.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like
           [Glycine max]
          Length = 333

 Score =  115 bits (289), Expect = 3e-24
 Identities = 70/147 (47%), Positives = 92/147 (62%), Gaps = 12/147 (8%)
 Frame = +2

Query: 5   LVLNEKPFFNE--PIYTGMNRKLFDKMSRDYNNNVFVLSCKTMMFLLRNPPKNFEGFVVE 178
           LVLN+KPFFN+      G  R LF+K S  YN+ VF L+CKT++ LLR+PP+NF+ FVV 
Sbjct: 157 LVLNDKPFFNDFWCEMIGRGRGLFEKKSLAYNDTVFALNCKTILGLLRHPPRNFQTFVVG 216

Query: 179 HFRNRGRAILTACKAYTNGFVRVGDYQD--SGVFLPERVKVSKKF--LMNVQYPLLVQ-- 340
           HFRNR RAIL AC  Y NG VRVG Y +   G     RV+VS+KF   M V YP L++  
Sbjct: 217 HFRNRARAILGACDDYANGRVRVGRYSEDGDGEASDRRVRVSEKFRESMRVLYPQLLEIF 276

Query: 341 ----AFSKNDSSLKEFLVQLNQMMKKI 409
               AFS++D+     + + N + K +
Sbjct: 277 LRCGAFSQSDAERYLKMERTNVLSKNM 303


>ref|XP_002519241.1| conserved hypothetical protein [Ricinus communis]
           gi|223541556|gb|EEF43105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  110 bits (274), Expect = 2e-22
 Identities = 66/140 (47%), Positives = 87/140 (62%), Gaps = 12/140 (8%)
 Frame = +2

Query: 5   LVLNEKPFFNEP---IYTGMNRKLFDKMSRDYNNNVFVLSCKTMMFLLRNPPKNFEGFVV 175
           LVLNEKP+FNEP   I+ G  R +++K S  Y+ +VFVLSCKT++F LR PPKNFEGFVV
Sbjct: 178 LVLNEKPYFNEPGIGIWPG--RAIWEKKSNSYSEDVFVLSCKTVLFNLRRPPKNFEGFVV 235

Query: 176 EHFRNRGRAILTACKAYTNGFVRVG----DYQDSGVFLPER---VKVSKKF--LMNVQYP 328
            HF+ R   IL AC AY NG V +G    D  D  +    R    +VS+KF  ++   YP
Sbjct: 236 RHFKERAPMILLACNAYVNGRVGIGYYNYDTSDGSLSSTSRSLGTEVSQKFKAMILQLYP 295

Query: 329 LLVQAFSKNDSSLKEFLVQL 388
            LV  F++  ++L+    QL
Sbjct: 296 ELVAGFTRIGAALENLSEQL 315


>ref|XP_003550560.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like
           [Glycine max]
          Length = 338

 Score =  109 bits (272), Expect = 3e-22
 Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
 Frame = +2

Query: 5   LVLNEKPFFNEPIYTGMNRKL-FDKMSRDYNNNVFVLSCKTMMFLLRNPPKNFEGFVVEH 181
           LVLNE P+FNEP  T + R +  +  SR YN +VF  +CK    LL++PP+NFE FV  H
Sbjct: 163 LVLNENPYFNEPGATTLGRLINLESTSRVYNEDVFTQTCKISFHLLQDPPRNFEAFVSAH 222

Query: 182 FRNRGRAILTACKAYTNGFVRVGDYQDSGVFLPERVKVSKKF--LMNVQYPLLVQAFSKN 355
           FR R   IL AC  Y NG VRVG Y    +    RV+VS+ F   M   YPLL++AF +N
Sbjct: 223 FRERASLILAACNEYANGRVRVGYYSSDHLPPLSRVQVSRSFKKQMIEFYPLLLRAFRQN 282

Query: 356 D-SSLKEFLVQLNQMMKKIEDEYTE 427
           D +SL  F+  L    ++ E + TE
Sbjct: 283 DNASLGGFVQHLELETEESEYKSTE 307


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