BLASTX nr result

ID: Panax21_contig00037384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037384
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containi...   132   6e-29
emb|CBI24637.3| unnamed protein product [Vitis vinifera]              132   6e-29
emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]   132   6e-29
ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002530303.1| ATP binding protein, putative [Ricinus commu...   100   2e-19

>ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Vitis vinifera]
          Length = 237

 Score =  132 bits (331), Expect = 6e-29
 Identities = 77/123 (62%), Positives = 85/123 (69%)
 Frame = +1

Query: 70  MGSLRFLSSQMGFLQNSQICKPQFSLPPVSTLMITCGLRNVNRKPMWRSRVLSTEAIQAV 249
           MGSL+F   Q+ F QN Q  KPQF         I CGLR   RKP+WRSRVLSTEAIQ V
Sbjct: 1   MGSLKFQLPQLRFPQNPQTHKPQFP-------KIACGLRGGPRKPLWRSRVLSTEAIQVV 53

Query: 250 QSLKLAKSPDKLEQVFSSRISRLLKADLLDTLTELKRQNELDLALKVNTKNTGHFWVIKL 429
           QSLKLAKS  KLE+VFSSR+SRLLK+DLLDTL EL+RQ ELDL LKV       F  I+ 
Sbjct: 54  QSLKLAKSSIKLEEVFSSRVSRLLKSDLLDTLAELQRQGELDLTLKV-------FEFIRK 106

Query: 430 ETW 438
           E W
Sbjct: 107 EVW 109


>emb|CBI24637.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  132 bits (331), Expect = 6e-29
 Identities = 77/123 (62%), Positives = 85/123 (69%)
 Frame = +1

Query: 70  MGSLRFLSSQMGFLQNSQICKPQFSLPPVSTLMITCGLRNVNRKPMWRSRVLSTEAIQAV 249
           MGSL+F   Q+ F QN Q  KPQF         I CGLR   RKP+WRSRVLSTEAIQ V
Sbjct: 6   MGSLKFQLPQLRFPQNPQTHKPQFP-------KIACGLRGGPRKPLWRSRVLSTEAIQVV 58

Query: 250 QSLKLAKSPDKLEQVFSSRISRLLKADLLDTLTELKRQNELDLALKVNTKNTGHFWVIKL 429
           QSLKLAKS  KLE+VFSSR+SRLLK+DLLDTL EL+RQ ELDL LKV       F  I+ 
Sbjct: 59  QSLKLAKSSIKLEEVFSSRVSRLLKSDLLDTLAELQRQGELDLTLKV-------FEFIRK 111

Query: 430 ETW 438
           E W
Sbjct: 112 EVW 114


>emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]
          Length = 303

 Score =  132 bits (331), Expect = 6e-29
 Identities = 77/123 (62%), Positives = 85/123 (69%)
 Frame = +1

Query: 70  MGSLRFLSSQMGFLQNSQICKPQFSLPPVSTLMITCGLRNVNRKPMWRSRVLSTEAIQAV 249
           MGSL+F   Q+ F QN Q  KPQF         I CGLR   RKP+WRSRVLSTEAIQ V
Sbjct: 1   MGSLKFQLPQLRFPQNPQTHKPQFP-------KIACGLRGGPRKPLWRSRVLSTEAIQVV 53

Query: 250 QSLKLAKSPDKLEQVFSSRISRLLKADLLDTLTELKRQNELDLALKVNTKNTGHFWVIKL 429
           QSLKLAKS  KLE+VFSSR+SRLLK+DLLDTL EL+RQ ELDL LKV       F  I+ 
Sbjct: 54  QSLKLAKSSIKLEEVFSSRVSRLLKSDLLDTLAELQRQGELDLTLKV-------FEFIRK 106

Query: 430 ETW 438
           E W
Sbjct: 107 EVW 109


>ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|222852675|gb|EEE90222.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  107 bits (267), Expect = 2e-21
 Identities = 67/124 (54%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
 Frame = +1

Query: 70  MGSLRFLSSQMGFLQNSQICKPQFSLPPVSTLMITCGLRNVNRKPMWRSRVLSTEAIQAV 249
           MGSL+F   Q+GF +  Q  KP   LP  S  +ITC LR   R P+WR++ LSTEAIQ +
Sbjct: 1   MGSLKFQIPQLGFHKTLQ--KPH--LPRSS--VITCSLRGKPRPPLWRAKRLSTEAIQVI 54

Query: 250 QSLKLAKSPD-KLEQVFSSRISRLLKADLLDTLTELKRQNELDLALKVNTKNTGHFWVIK 426
           QSLKLA+S   +LE+VF+S++SRLLK DLLDTL  L+ QNELDLALKV       F  ++
Sbjct: 55  QSLKLARSSTPRLEEVFNSKLSRLLKTDLLDTLAVLQNQNELDLALKV-------FEFVR 107

Query: 427 LETW 438
            E W
Sbjct: 108 KEVW 111


>ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
           gi|223530159|gb|EEF32070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 244

 Score =  100 bits (249), Expect = 2e-19
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +1

Query: 70  MGSLRFLSSQMGFLQNSQICKPQFSLPPVSTLMITCGLRNVNRKPMWRSRVLSTEAIQAV 249
           M SL+F       L+  QI K     P   T  +TC LR   RKP+WRS+ +STEAIQA+
Sbjct: 1   MASLKFKFQFPPPLRIFQIPKT----PNFKTSFVTCSLRGGPRKPLWRSKRVSTEAIQAI 56

Query: 250 QSLKLAKSPD-KLEQVFSSRISRLLKADLLDTLTELKRQNELDLALKVNTKNTGHFWVIK 426
           QSLKLAKS + +L QVF++++SRLLK DLLD L  L++QNELDLALKV       F  ++
Sbjct: 57  QSLKLAKSSNPRLHQVFNTKLSRLLKTDLLDVLEILQKQNELDLALKV-------FEFVQ 109

Query: 427 LETW 438
            E W
Sbjct: 110 KEIW 113


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