BLASTX nr result
ID: Panax21_contig00037383
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00037383
(514 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97104.1| retrotransposon protein, putative, unclassified [... 137 3e-46
emb|CAD41578.3| OSJNBa0088I22.10 [Oryza sativa Japonica Group] 134 1e-45
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 140 1e-45
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ... 140 1e-45
emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group] 133 1e-45
>gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1412
Score = 137 bits (346), Expect(3) = 3e-46
Identities = 58/91 (63%), Positives = 76/91 (83%)
Frame = -1
Query: 274 KKKDGTWRLCVDYRALNAITLKDRFPIPTVDELFDELHAARFYSKIDLKSGYHQIRMAAE 95
KKKDGTWRLC+DYR LN+IT+K +FP+P +DEL DEL ++ +SK+DL++GYHQIR+
Sbjct: 575 KKKDGTWRLCIDYRQLNSITMKGKFPMPVIDELLDELSGSKVFSKLDLRAGYHQIRLVEG 634
Query: 94 DIHKTAFKTHSGHYEFLVMPFGLSNAPSTFQ 2
+ HKT F+THSGHYE+ VM FGL+ AP+TFQ
Sbjct: 635 EEHKTTFQTHSGHYEYRVMSFGLTGAPATFQ 665
Score = 69.7 bits (169), Expect(3) = 3e-46
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = -3
Query: 458 PPPRTIDHHIPLEPTSKQINVRPYRFSHFQKNEIEQQVQGMLETGIIKPSTSPYSSLVLL 279
PP R DH IPL+ +K + +RPYR + +K+EIE+QV+ ML +G+I+PS S +SS LL
Sbjct: 514 PPKRACDHSIPLKSHAKPVFLRPYRHNPARKDEIEKQVKEMLLSGVIQPSNSAFSSPALL 573
Query: 278 VKKK 267
VKKK
Sbjct: 574 VKKK 577
Score = 23.9 bits (50), Expect(3) = 3e-46
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 513 IASLLTQFKEIFNDPTQL 460
I SLLT+F +F+DP L
Sbjct: 496 IQSLLTEFSALFDDPQGL 513
>emb|CAD41578.3| OSJNBa0088I22.10 [Oryza sativa Japonica Group]
Length = 1157
Score = 134 bits (336), Expect(3) = 1e-45
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -1
Query: 274 KKKDGTWRLCVDYRALNAITLKDRFPIPTVDELFDELHAARFYSKIDLKSGYHQIRMAAE 95
KKK G+WR+C+DYR LN IT K +P+P +DEL DEL AR++SK+DL++GYHQIRMA
Sbjct: 574 KKKVGSWRVCIDYRQLNNITQKGTYPMPVIDELLDELAGARYFSKLDLRAGYHQIRMAEG 633
Query: 94 DIHKTAFKTHSGHYEFLVMPFGLSNAPSTFQ 2
+ HKTAF+THSGHYE+ VM FGL+ AP TFQ
Sbjct: 634 EEHKTAFQTHSGHYEYKVMSFGLTGAPGTFQ 664
Score = 72.8 bits (177), Expect(3) = 1e-45
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = -3
Query: 458 PPPRTIDHHIPLEPTSKQINVRPYRFSHFQKNEIEQQVQGMLETGIIKPSTSPYSSLVLL 279
PP R DH IPL P SK + +RPYR + K+EIE+QVQ ML+ G+I+ S+S +SS LL
Sbjct: 513 PPKRYCDHRIPLFPNSKPVFIRPYRHTPGHKDEIERQVQEMLQNGVIQHSSSAFSSPALL 572
Query: 278 VKKK 267
VKKK
Sbjct: 573 VKKK 576
Score = 22.7 bits (47), Expect(3) = 1e-45
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 513 IASLLTQFKEIFNDPTQL 460
+ LLT+F+E+F +P L
Sbjct: 495 VQPLLTEFQEVFQEPKGL 512
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 140 bits (353), Expect(3) = 1e-45
Identities = 59/91 (64%), Positives = 78/91 (85%)
Frame = -1
Query: 274 KKKDGTWRLCVDYRALNAITLKDRFPIPTVDELFDELHAARFYSKIDLKSGYHQIRMAAE 95
KKKDGTWRLC+DY+ LNAIT+K ++P+P +DEL DEL A+++SK+DL++GYHQIR+
Sbjct: 119 KKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFSKLDLRAGYHQIRLQPG 178
Query: 94 DIHKTAFKTHSGHYEFLVMPFGLSNAPSTFQ 2
+ HKTAF+THSGHYE+ VM FGL+ AP+TFQ
Sbjct: 179 EEHKTAFQTHSGHYEYRVMSFGLTGAPATFQ 209
Score = 66.2 bits (160), Expect(3) = 1e-45
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = -3
Query: 458 PPPRTIDHHIPLEPTSKQINVRPYRFSHFQKNEIEQQVQGMLETGIIKPSTSPYSSLVLL 279
PP R DH IPL + +N+RPYR + K+EIE+QV ML++G+I+ S S +SS LL
Sbjct: 58 PPVRNCDHKIPLMEGASPVNLRPYRHTPALKDEIERQVTEMLQSGVIQNSNSAFSSPALL 117
Query: 278 VKKK 267
VKKK
Sbjct: 118 VKKK 121
Score = 22.3 bits (46), Expect(3) = 1e-45
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 513 IASLLTQFKEIFNDPTQL 460
I +L +F+E+F +PT++
Sbjct: 40 IKHVLDRFQEVFQEPTEM 57
>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1920
Score = 140 bits (353), Expect(3) = 1e-45
Identities = 59/91 (64%), Positives = 78/91 (85%)
Frame = -1
Query: 274 KKKDGTWRLCVDYRALNAITLKDRFPIPTVDELFDELHAARFYSKIDLKSGYHQIRMAAE 95
KKKDGTWRLC+DY+ LNAIT+K ++P+P +DEL DEL A+++SK+DL++GYHQIR+
Sbjct: 119 KKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFSKLDLRAGYHQIRLQPG 178
Query: 94 DIHKTAFKTHSGHYEFLVMPFGLSNAPSTFQ 2
+ HKTAF+THSGHYE+ VM FGL+ AP+TFQ
Sbjct: 179 EEHKTAFQTHSGHYEYRVMSFGLTGAPATFQ 209
Score = 66.2 bits (160), Expect(3) = 1e-45
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = -3
Query: 458 PPPRTIDHHIPLEPTSKQINVRPYRFSHFQKNEIEQQVQGMLETGIIKPSTSPYSSLVLL 279
PP R DH IPL + +N+RPYR + K+EIE+QV ML++G+I+ S S +SS LL
Sbjct: 58 PPVRNCDHKIPLMEGASPVNLRPYRHTPALKDEIERQVTEMLQSGVIQNSNSAFSSPALL 117
Query: 278 VKKK 267
VKKK
Sbjct: 118 VKKK 121
Score = 22.3 bits (46), Expect(3) = 1e-45
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 513 IASLLTQFKEIFNDPTQL 460
I +L +F+E+F +PT++
Sbjct: 40 IKHVLDRFQEVFQEPTEM 57
>emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
Length = 1817
Score = 133 bits (334), Expect(2) = 1e-45
Identities = 58/91 (63%), Positives = 77/91 (84%)
Frame = -1
Query: 274 KKKDGTWRLCVDYRALNAITLKDRFPIPTVDELFDELHAARFYSKIDLKSGYHQIRMAAE 95
KKKDGTWRL +DYR LNAIT+K +P+P +DEL DEL A++++K+DL++GYHQIRMA
Sbjct: 841 KKKDGTWRLVIDYRKLNAITVKGTYPMPVIDELLDELAHAKWFTKLDLRAGYHQIRMAPG 900
Query: 94 DIHKTAFKTHSGHYEFLVMPFGLSNAPSTFQ 2
+ +KTAF+TH+GHYE+ VM FGL+ AP+TFQ
Sbjct: 901 EEYKTAFQTHTGHYEYTVMSFGLTGAPATFQ 931
Score = 75.1 bits (183), Expect(2) = 1e-45
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = -3
Query: 458 PPPRTIDHHIPLEPTSKQINVRPYRFSHFQKNEIEQQVQGMLETGIIKPSTSPYSSLVLL 279
PP R DH IPL P + +N+RPYRF+ K+EIEQQ+ ML++G+I+PS S +SS LL
Sbjct: 780 PPKRYCDHTIPLVPGAAPVNLRPYRFNPALKDEIEQQISDMLKSGVIQPSHSAFSSPALL 839
Query: 278 VKKK 267
VKKK
Sbjct: 840 VKKK 843