BLASTX nr result

ID: Panax21_contig00037348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037348
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabac...   211   7e-53
ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulg...   186   1e-45
ref|XP_002516624.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_002539036.1| conserved hypothetical protein [Ricinus comm...    92   5e-17
ref|XP_002516625.1| conserved hypothetical protein [Ricinus comm...    69   3e-10

>ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabacum]
           gi|56806655|dbj|BAD83556.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 109

 Score =  211 bits (536), Expect = 7e-53
 Identities = 101/106 (95%), Positives = 103/106 (97%)
 Frame = +2

Query: 2   RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWITGTNVIEWNSRRVTRST 181
           RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRS +LWI GTNV+EWNSRRVTRST
Sbjct: 4   RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSFKLWIKGTNVVEWNSRRVTRST 63

Query: 182 VPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDRRCG 319
           VPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDRR G
Sbjct: 64  VPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDRRYG 109


>ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulgaris subsp. maritima]
           gi|346683127|ref|YP_004842056.1| hypothetical protein
           BemaM_p008 [Beta macrocarpa]
           gi|317905687|emb|CBX33234.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439767|emb|CBX33286.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320147999|emb|CBJ20665.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500045|emb|CBX24861.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939224|emb|CBL52070.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 145

 Score =  186 bits (473), Expect = 1e-45
 Identities = 91/105 (86%), Positives = 97/105 (92%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2   RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWITGTNVIEWNSRRVTRST 181
           RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWI GTNV++W+S+RVTRST
Sbjct: 19  RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWIRGTNVVKWDSKRVTRST 78

Query: 182 VPRCEVQVVMITPGYALAPLTGTPEPANARENPG---RSVLHSSD 307
           VPRCEVQVVMITPGYALAPLTGTP PANARENPG    S+L + D
Sbjct: 79  VPRCEVQVVMITPGYALAPLTGTPGPANARENPGLGRSSILPTGD 123


>ref|XP_002516624.1| conserved hypothetical protein [Ricinus communis]
           gi|223544226|gb|EEF45748.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = -1

Query: 524 ITPVRHEAADAESAPMPLAMPCLVPRHGGGSVARHEHRAKGRLSNSSEPPYLTTT 360
           +  +RHEAAD ESAPMPLAMP LVPRHGGGSVARH+HRAKGR SNSS+ PYLTTT
Sbjct: 36  VVELRHEAADVESAPMPLAMPYLVPRHGGGSVARHQHRAKGRWSNSSKLPYLTTT 90


>ref|XP_002539036.1| conserved hypothetical protein [Ricinus communis]
           gi|223509128|gb|EEF23348.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = -2

Query: 121 PNRTQQRGTTRPYSQRGGWHYWQRPSGENAAGAKRGRPAP 2
           PNRTQQRGTTRPYSQRGGWHYW+RPSGENAAGAKRGRPAP
Sbjct: 1   PNRTQQRGTTRPYSQRGGWHYWKRPSGENAAGAKRGRPAP 40


>ref|XP_002516625.1| conserved hypothetical protein [Ricinus communis]
           gi|223544227|gb|EEF45749.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +2

Query: 2   RRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRL 124
           R RPT LRA GVF RRS  VVPSSPLAVW GCPSLLRSVRL
Sbjct: 126 RHRPTMLRAYGVFTRRSFLVVPSSPLAVWVGCPSLLRSVRL 166


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