BLASTX nr result

ID: Panax21_contig00037331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037331
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219...    70   2e-10
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    69   4e-10
dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]                 69   5e-10
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    67   2e-09

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
 Frame = -1

Query: 481 VKSARDYLHSTQHALSLNPGDPSLLALQKTHSTNLWAALI-CEEKLLKQKSRIQWLKDGD 305
           VK A++ +   Q AL     +P +L +++    + +A+ +  EE   KQK+RIQWL  GD
Sbjct: 274 VKDAKNEMDKAQQALHTAHENP-ILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGD 332

Query: 304 KNTRFFHNQVKHR*NINKIMAIENVEGVICSGHPAVQKVAMDHFIDLLGTQSNADCSGTF 125
           +NT +FH  V  R N NK++++   +G +  GH AV+   + +F  +LG           
Sbjct: 333 QNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSEVIAYFHRVLGVDQMPRVLNEE 392

Query: 124 ASLDSIQPNLVSSHQALFLERDVSNEEILSTLKHMKQNKSP 2
               +I   L S+ Q + L + V+ +EI   +  +K NK+P
Sbjct: 393 VMESAINLKLSSTQQHV-LAQVVTRKEIKHAMFSLKNNKAP 432


>ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219773 [Cucumis sativus]
          Length = 209

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/129 (30%), Positives = 68/129 (52%)
 Frame = -1

Query: 388 STNLWAALICEEKLLKQKSRIQWLKDGDKNTRFFHNQVKHR*NINKIMAIENVEGVICSG 209
           + N W A+  EE  ++QK +I+WLK  D+NT FFH  V+ R + N + ++ + +G   + 
Sbjct: 25  TVNFWTAVRMEEAAMRQKLQIRWLKLDDQNTAFFHGSVRSRQSSNALRSVIDPDGNRLTN 84

Query: 208 HPAVQKVAMDHFIDLLGTQSNADCSGTFASLDSIQPNLVSSHQALFLERDVSNEEILSTL 29
           H  V +V +++F D+LG+Q N        S++ I     +      L+  +  EE+   L
Sbjct: 85  HDQVTQVVVNYFKDILGSQ-NISYKELSTSIEEIVQFRWTEECCQTLQSPIGREEVRRVL 143

Query: 28  KHMKQNKSP 2
             M+  K+P
Sbjct: 144 FSMEGGKAP 152


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
 Frame = -1

Query: 493 LLSNVKSARDYLHSTQHALSLNPGDPSLLALQKTHSTNLWAAL-ICEEKLLKQKSRIQWL 317
           L   V  A   L + Q+ L   P   S LA  +  +   WA L + EE+ L QKSR+ WL
Sbjct: 302 LEKRVVQAAQNLKTCQNNLLAAPS--SYLAGLEKEAHRSWAELALAEERFLCQKSRVLWL 359

Query: 316 KDGDKNTRFFHNQVKHR*NINKIMAIENVEGVICSGHPAVQKVAMDHFIDLLGTQSNADC 137
           K GD NT FFH  +  R  IN+I  + +  G        +Q   +D F +L G+ S+   
Sbjct: 360 KCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLIS 419

Query: 136 SGTFASLDSIQPNLVSSHQALFLERDVSNEEILSTLKHMKQNKSP 2
           +   + ++S+       +    LE +VS  +I S    +  NKSP
Sbjct: 420 AEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSP 464


>dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]
          Length = 177

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/116 (33%), Positives = 63/116 (54%)
 Frame = -1

Query: 493 LLSNVKSARDYLHSTQHALSLNPGDPSLLALQKTHSTNLWAALICEEKLLKQKSRIQWLK 314
           + S ++ AR+ L   Q +L   P +PSL + +KT     W ++  EE  L+Q+SR+QWL 
Sbjct: 49  ITSRIEKAREDLEVVQSSLQAAPLNPSLHSQEKTEQLRKWNSI--EESALRQQSRVQWLT 106

Query: 313 DGDKNTRFFHNQVKHR*NINKIMAIENVEGVICSGHPAVQKVAMDHFIDLLGTQSN 146
            GD N  FF + +K R   N I  + + + V  + H  +QK  +  F  L+GT ++
Sbjct: 107 LGDSNNHFFVSAIKERNFRNSIDVLFDDQDVKLTTHQDIQKEVVGFFKGLMGTSAS 162


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
 Frame = -1

Query: 478 KSARDYLHSTQHALSLNPGDPSLLALQKT--HSTNLWAALICEEKLLKQKSRIQWLKDGD 305
           K A D L S Q  L  NP D SL  ++       N +AA +  E   +QKSRI+WL+DGD
Sbjct: 328 KEALDSLESIQSQLLTNPSD-SLFRVEHVARKKWNFFAAAL--ESFYRQKSRIKWLQDGD 384

Query: 304 KNTRFFHNQVKHR*NINKIMAIENVEGVICSGHPAVQKVAMDHFIDLLGTQSNADCSGTF 125
            NTRFFH  +      N I  +   + V       V+++ + ++  LLG+ S+     + 
Sbjct: 385 ANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSV 444

Query: 124 ASLDSIQPNLVSSHQALFLERDVSNEEILSTLKHMKQNKSP 2
             +  I P   +   A  L    S++EI + +  M +NK+P
Sbjct: 445 QRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAP 485


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