BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037310
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    76   3e-12
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    76   3e-12
gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]          75   4e-12
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      74   1e-11
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    72   6e-11

>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 RIQWLKDGDKNLGYFYNQIKNQWSQNKILVIESDAGVLCTEQKDIQLIAI*HFRSLLGTS 197
           R QW+K+GD+N GYF+   K ++SQN++  I  D G + T  K+I   A   F ++  T+
Sbjct: 497 RNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTN 556

Query: 196 SM-VGDFNFLDLSPYVSNVISEEQASMIEKDVSDLEIMSTLKSIKKNKSPGPDSFNVNLF 20
            + V   +F D    V+N ++ +    + K+ SD EI   +  I  +K+PGPD      +
Sbjct: 557 GIKVSPIDFADFKSTVTNTVNLD----LTKEFSDTEIYDAICQIGDDKAPGPDGLTARFY 612

Query: 19  ILAWDI 2
              WDI
Sbjct: 613 KNCWDI 618


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376  RIQWLKDGDKNLGYFYNQIKNQWSQNKILVIESDAGVLCTEQKDIQLIAI*HFRSLLGTS 197
            R QW+K+GD+N GYF+   K ++SQN++  I  D G + T  K+I   A   F ++  T+
Sbjct: 723  RNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTN 782

Query: 196  SM-VGDFNFLDLSPYVSNVISEEQASMIEKDVSDLEIMSTLKSIKKNKSPGPDSFNVNLF 20
             + V   +F D    V+N ++ +    + K+ SD EI   +  I  +K+PGPD      +
Sbjct: 783  GIKVSPIDFADFKSTVTNTVNLD----LTKEFSDTEIYDAICQIGDDKAPGPDGLTARFY 838

Query: 19   ILAWDI 2
               WDI
Sbjct: 839  KNCWDI 844


>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
          Length = 671

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/124 (33%), Positives = 64/124 (51%)
 Frame = -3

Query: 373 IQWLKDGDKNLGYFYNQIKNQWSQNKILVIESDAGVLCTEQKDIQLIAI*HFRSLLGTSS 194
           I WL++GD+N  +F   + ++ S+N I  + S AG+  +   DI+   + +F+  L T S
Sbjct: 322 INWLQNGDRNTAFFQRSVTSRRSKNNIYSVNSRAGITLSSPSDIKQEFVDYFQDFLQTPS 381

Query: 193 MVGDFNFLDLSPYVSNVISEEQASMIEKDVSDLEIMSTLKSIKKNKSPGPDSFNVNLFIL 14
           +  + +  D+  Y+     E  A  +   VS  EI  TL S+ KNKS GPD F    F  
Sbjct: 382 IPCNLSTEDIQQYIDFRCPENLAQQLVARVSPEEIKHTLFSMPKNKSSGPDGFTPEFFQA 441

Query: 13  AWDI 2
           +W I
Sbjct: 442 SWAI 445


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/125 (33%), Positives = 72/125 (57%)
 Frame = -3

Query: 376 RIQWLKDGDKNLGYFYNQIKNQWSQNKILVIESDAGVLCTEQKDIQLIAI*HFRSLLGTS 197
           RIQWL  GD+N+ +F+   KN+ ++NKIL I+++ G      K+I   A+ +F  +  TS
Sbjct: 143 RIQWLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVFGNKEISKEALRYFSEIF-TS 201

Query: 196 SMVGDFNFLDLSPYVSNVISEEQASMIEKDVSDLEIMSTLKSIKKNKSPGPDSFNVNLFI 17
           S+ G  N  D    ++ V+S+E  + + +DV+  E+  ++ SI   ++PGPD    + + 
Sbjct: 202 SLQG--NIQDSLGNINRVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLTASFYQ 259

Query: 16  LAWDI 2
             WDI
Sbjct: 260 TYWDI 264


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/125 (31%), Positives = 67/125 (53%)
 Frame = -3

Query: 376 RIQWLKDGDKNLGYFYNQIKNQWSQNKILVIESDAGVLCTEQKDIQLIAI*HFRSLLGTS 197
           R+ WL  GD+N GYF+   +N+ +QN++ V+E   GV   E+  I  I   +F+ +  TS
Sbjct: 236 RVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQIF-TS 294

Query: 196 SMVGDFNFLDLSPYVSNVISEEQASMIEKDVSDLEIMSTLKSIKKNKSPGPDSFNVNLFI 17
              GDF+ +D +  +  ++S+     + +  +D E+   + SI  +K+PGPD F    + 
Sbjct: 295 ESDGDFSVVDEA--IEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYH 352

Query: 16  LAWDI 2
             W I
Sbjct: 353 SYWHI 357