BLASTX nr result

ID: Panax21_contig00037294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037294
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
ref|NP_172077.1| uncharacterized protein [Arabidopsis thaliana] ...   149   5e-34
ref|XP_002889571.1| hypothetical protein ARALYDRAFT_470597 [Arab...   147   1e-33
ref|NP_180718.2| uncharacterized protein [Arabidopsis thaliana] ...   144   2e-32

>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  164 bits (414), Expect = 2e-38
 Identities = 80/170 (47%), Positives = 112/170 (65%), Gaps = 9/170 (5%)
 Frame = +3

Query: 207 ISPSEEDVVLTNSSHLTSQEVMRRRSHNLKELAKVYTDHYWKLMEDLRVEHRDYVWKFGL 386
           +SPS +D VL+ ++H+T QE+++RRSH LK+L+K + D+YW LME+L+V +R+Y WK+G+
Sbjct: 51  LSPSLKDQVLSRATHITRQELLKRRSHKLKQLSKCFKDYYWALMEELKVLYREYYWKYGV 110

Query: 387 NPFQEGNKNDVKESKE---------INADXXXXXXXXXXXETXXXXXXXXXXXQLCAFNG 539
           +PF+E + N +++ ++         +  +                          C F G
Sbjct: 111 SPFKEDHHNTLQKVEQHKQGGGFGVLERENGEGEANIEVIGENNNNFSDLKSNHRCLFVG 170

Query: 540 CKLKAMALTTYCKLHILSDKKQQLYKPCDYVIKSALAGAITCGKPILRST 689
           CKLKAMALT++C LHILSD KQ+LYKPC YVIKSA AG ITCGKPILRST
Sbjct: 171 CKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRST 220


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  161 bits (407), Expect = 1e-37
 Identities = 77/169 (45%), Positives = 110/169 (65%), Gaps = 8/169 (4%)
 Frame = +3

Query: 207 ISPSEEDVVLTNSSHLTSQEVMRRRSHNLKELAKVYTDHYWKLMEDLRVEHRDYVWKFGL 386
           +SP+ +D VL+ ++H+T QE+++RRS+ LK+L+K + DHYW LME+L++++R+Y W++G+
Sbjct: 48  LSPTLKDQVLSRATHITRQELLKRRSYKLKQLSKCFKDHYWALMEELKIQYREYYWEYGV 107

Query: 387 NPFQEGNKNDVKESKE--------INADXXXXXXXXXXXETXXXXXXXXXXXQLCAFNGC 542
           +PF+E      K+ ++        +  +                          C F GC
Sbjct: 108 SPFKEDQNTLQKQEQQKQGGGIGVLERENEESGANIEVIGENNTNVSDLKSNHRCLFVGC 167

Query: 543 KLKAMALTTYCKLHILSDKKQQLYKPCDYVIKSALAGAITCGKPILRST 689
           KLKAMALT++C LHILSD KQ+LYKPC YVIKSA AG ITCGKPILRST
Sbjct: 168 KLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRST 216


>ref|NP_172077.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6850315|gb|AAF29392.1|AC009999_12 Contains similarity
           to a hypothetical protein from Arabidopsis thaliana
           gb|AC007071.6 [Arabidopsis thaliana]
           gi|26450161|dbj|BAC42199.1| unknown protein [Arabidopsis
           thaliana] gi|28827712|gb|AAO50700.1| unknown protein
           [Arabidopsis thaliana] gi|332189784|gb|AEE27905.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 280

 Score =  149 bits (376), Expect = 5e-34
 Identities = 77/162 (47%), Positives = 99/162 (61%)
 Frame = +3

Query: 207 ISPSEEDVVLTNSSHLTSQEVMRRRSHNLKELAKVYTDHYWKLMEDLRVEHRDYVWKFGL 386
           IS + ED +L NS+HLT  E++RRRSHNLK+L++ Y DHYW LMEDL+ +HR Y W +G+
Sbjct: 51  ISMAVEDQILGNSNHLTRPELLRRRSHNLKQLSRCYRDHYWALMEDLKAQHRYYSWNYGV 110

Query: 387 NPFQEGNKNDVKESKEINADXXXXXXXXXXXETXXXXXXXXXXXQLCAFNGCKLKAMALT 566
           +PF++ N +  K  K +              +              C  +GCK KAMALT
Sbjct: 111 SPFKDENYHQNKRRK-VEGQTGDEIEGSGDNDNNNNDGVKAGNCVACG-SGCKSKAMALT 168

Query: 567 TYCKLHILSDKKQQLYKPCDYVIKSALAGAITCGKPILRSTV 692
            YC+LHIL DKKQ+LY  C YV K A + AITC KP L STV
Sbjct: 169 NYCQLHILMDKKQKLYTSCTYVNKRAQSKAITCPKPTLASTV 210


>ref|XP_002889571.1| hypothetical protein ARALYDRAFT_470597 [Arabidopsis lyrata subsp.
           lyrata] gi|297335413|gb|EFH65830.1| hypothetical protein
           ARALYDRAFT_470597 [Arabidopsis lyrata subsp. lyrata]
          Length = 277

 Score =  147 bits (372), Expect = 1e-33
 Identities = 77/162 (47%), Positives = 98/162 (60%)
 Frame = +3

Query: 207 ISPSEEDVVLTNSSHLTSQEVMRRRSHNLKELAKVYTDHYWKLMEDLRVEHRDYVWKFGL 386
           IS + ED +L +SSH+T  E++RRRSHNLK+LA+ Y DHYW LMEDL+ +HR Y W +G+
Sbjct: 51  ISMAVEDQILGSSSHITRTELLRRRSHNLKQLARCYRDHYWALMEDLKAQHRYYSWNYGV 110

Query: 387 NPFQEGNKNDVKESKEINADXXXXXXXXXXXETXXXXXXXXXXXQLCAFNGCKLKAMALT 566
           +PF++ N    K  K +              +             +   NGCK KAMALT
Sbjct: 111 SPFKDENHQQNKRRK-VEGQTGDEIEGSGDNDNDGVKAGNC----VACGNGCKSKAMALT 165

Query: 567 TYCKLHILSDKKQQLYKPCDYVIKSALAGAITCGKPILRSTV 692
            YC+LHIL DKKQ+LY  C YV K A + AITC KP L STV
Sbjct: 166 NYCQLHILMDKKQKLYTSCTYVNKRAQSKAITCPKPTLASTV 207


>ref|NP_180718.2| uncharacterized protein [Arabidopsis thaliana]
           gi|30267817|gb|AAP21689.1| hypothetical protein
           [Arabidopsis thaliana] gi|50058973|gb|AAT69231.1|
           hypothetical protein At2g31600 [Arabidopsis thaliana]
           gi|330253471|gb|AEC08565.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 301

 Score =  144 bits (362), Expect = 2e-32
 Identities = 75/169 (44%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
 Frame = +3

Query: 207 ISPSEEDVVLTNSSHLTSQEVMRRRSHNLKELAKVYTDHYWKLMEDLRVEHRDYVWKFGL 386
           I+ S+ED +L  SSH+T  E+++RRSHNLK+LAK Y D+YW LMED++ +HRDY WK+G+
Sbjct: 63  ITMSQEDEILARSSHITRSELLKRRSHNLKQLAKCYRDNYWALMEDVKAQHRDYWWKYGI 122

Query: 387 NPFQEGNKNDVKESK-----EINADXXXXXXXXXXXETXXXXXXXXXXXQLCA--FNGCK 545
           + F++ N    K  +     +I                             C     GCK
Sbjct: 123 SQFKDENNQSNKRRRLGQEGDIGDGGDAVEGSGDNVTNNDGVKSDQYANSNCGSCMYGCK 182

Query: 546 LKAMALTTYCKLHILSDKKQQLYKPCDYVIKSALAGAITCGKPILRSTV 692
            KAMALT YC+LHIL D KQ+LY  C  VIK A AG + CGKP L STV
Sbjct: 183 AKAMALTKYCQLHILKDSKQKLYTGCTNVIKRAPAGPLLCGKPTLASTV 231


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