BLASTX nr result

ID: Panax21_contig00037292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037292
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]   206   2e-51
ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   205   3e-51
ref|XP_002265057.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   205   4e-51
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_002323383.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49

>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score =  206 bits (524), Expect = 2e-51
 Identities = 94/146 (64%), Positives = 121/146 (82%)
 Frame = -2

Query: 439 MEEIDIPEYFICPISLQIMRDPVTAVTGITYDRESIEHWLLTAEDATCPVTKQPLPRDSD 260
           M++I+IP+YF+CPISLQIM+DPVTA+TGITYDRESIE WLLTA+D TCPVTKQPL RD  
Sbjct: 7   MDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTTCPVTKQPLERDFV 66

Query: 259 LTPNHTLRRLIQAWCTANTSNGIDRIPTPKSALTISHVLKLHRQLKIPQLHLNSLRELDV 80
           LTPNHTLRRLIQAWC AN +NG+D+IPTPK+ L  +HV+KL R L + QL+L +L++++ 
Sbjct: 67  LTPNHTLRRLIQAWCAANATNGVDQIPTPKTPLDRTHVVKLIRDLGVAQLYLKTLQKMEA 126

Query: 79  RASENETNIKCMVESGTAKEMILLIL 2
              +NE N  CM ++G AK ++LLI+
Sbjct: 127 LTRDNERNRNCMADAGAAKAIVLLII 152


>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  205 bits (522), Expect = 3e-51
 Identities = 94/146 (64%), Positives = 120/146 (82%)
 Frame = -2

Query: 439 MEEIDIPEYFICPISLQIMRDPVTAVTGITYDRESIEHWLLTAEDATCPVTKQPLPRDSD 260
           M++I+IP+YF+CPISLQIM+DPVTA+TGITYDRESIE WLLTA+D TCPVTKQPL RD  
Sbjct: 7   MDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTTCPVTKQPLERDFV 66

Query: 259 LTPNHTLRRLIQAWCTANTSNGIDRIPTPKSALTISHVLKLHRQLKIPQLHLNSLRELDV 80
           LTPNHTLRRLIQAWC  N +NG+DRIPTPK+ L  +HV+KL R L + QL+L +L++++ 
Sbjct: 67  LTPNHTLRRLIQAWCADNATNGVDRIPTPKTPLDRTHVVKLIRDLGVAQLYLKTLQKMEA 126

Query: 79  RASENETNIKCMVESGTAKEMILLIL 2
              +NE N  CM ++G AK ++LLI+
Sbjct: 127 LTRDNERNRNCMADAGAAKAIVLLII 152


>ref|XP_002265057.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 406

 Score =  205 bits (521), Expect = 4e-51
 Identities = 98/141 (69%), Positives = 118/141 (83%)
 Frame = -2

Query: 439 MEEIDIPEYFICPISLQIMRDPVTAVTGITYDRESIEHWLLTAEDATCPVTKQPLPRDSD 260
           M++++IPEYFICPISLQIMRDPVTA+TGITYDRESIE+WL    + TCPVTKQPLP DSD
Sbjct: 1   MDDVEIPEYFICPISLQIMRDPVTAITGITYDRESIENWLFKGNN-TCPVTKQPLPPDSD 59

Query: 259 LTPNHTLRRLIQAWCTANTSNGIDRIPTPKSALTISHVLKLHRQLKIPQLHLNSLRELDV 80
           LTPNHTLRRLIQ+WCT N SNG+ RIPTPK+ LT SHV+KL ++L +PQL L +LR+L++
Sbjct: 60  LTPNHTLRRLIQSWCTENASNGVVRIPTPKAPLTKSHVVKLVKELWVPQLQLKTLRKLEL 119

Query: 79  RASENETNIKCMVESGTAKEM 17
            A ENE N + MVE+G  K M
Sbjct: 120 LAMENERNRRYMVEAGVIKSM 140


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  202 bits (513), Expect = 3e-50
 Identities = 91/145 (62%), Positives = 117/145 (80%)
 Frame = -2

Query: 439 MEEIDIPEYFICPISLQIMRDPVTAVTGITYDRESIEHWLLTAEDATCPVTKQPLPRDSD 260
           M++I++P++F+CPISLQIM+DPVT +TGITYDRESIEHWL T+++  CPVTKQPL +D D
Sbjct: 1   MDDIEVPKFFVCPISLQIMKDPVTTITGITYDRESIEHWLFTSQNTACPVTKQPLQKDLD 60

Query: 259 LTPNHTLRRLIQAWCTANTSNGIDRIPTPKSALTISHVLKLHRQLKIPQLHLNSLRELDV 80
           LTPNHTLRRLIQAWCT N S+G+DRIPTPK  L  +HVLKL + L   +L + +L  L++
Sbjct: 61  LTPNHTLRRLIQAWCTENASHGVDRIPTPKPCLDKAHVLKLIKNLSHHELQIKTLTRLEL 120

Query: 79  RASENETNIKCMVESGTAKEMILLI 5
            A+ENE N KCMV++G  K M+L I
Sbjct: 121 LAAENERNRKCMVDAGLPKAMLLFI 145


>ref|XP_002323383.1| predicted protein [Populus trichocarpa] gi|222868013|gb|EEF05144.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  198 bits (504), Expect = 3e-49
 Identities = 90/146 (61%), Positives = 118/146 (80%)
 Frame = -2

Query: 439 MEEIDIPEYFICPISLQIMRDPVTAVTGITYDRESIEHWLLTAEDATCPVTKQPLPRDSD 260
           M++I++P +FICPI LQIM+DPVT +TGITYDRESIE WL T+E+ TCPVTKQ LP+DSD
Sbjct: 1   MDDIEVPRFFICPIYLQIMKDPVTTITGITYDRESIERWLFTSENTTCPVTKQSLPKDSD 60

Query: 259 LTPNHTLRRLIQAWCTANTSNGIDRIPTPKSALTISHVLKLHRQLKIPQLHLNSLRELDV 80
           LTPNHTLRRLIQAWCT N S+G+DRIPTPK  L  ++VLKL + L   +L + +L +++V
Sbjct: 61  LTPNHTLRRLIQAWCTENASHGVDRIPTPKPCLDKAYVLKLIKNLSHHKLQIEALTQMEV 120

Query: 79  RASENETNIKCMVESGTAKEMILLIL 2
            A+ENE N KCMV++G  K +++ I+
Sbjct: 121 LAAENERNRKCMVDAGLPKALLVFIV 146


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