BLASTX nr result

ID: Panax21_contig00037287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037287
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27249.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12

>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/104 (42%), Positives = 65/104 (62%)
 Frame = +1

Query: 127 ERNNE*NMLKPITLLHKNLPRFIISKAQLWFRTLTLLPTHQKSEHLPKIEQTLASIHSIS 306
           ++N   N L+PI    + + R  +    L +R LT+       +  P+I++T+ASI SIS
Sbjct: 32  KKNEIINPLRPIE--KRTMKRISLLHRHLQWRNLTVTAL----QRTPEIDRTIASIQSIS 85

Query: 307 VNQFFALLDLCKNKFFLQKVHSLLIVHGLTGDRLYQTKLVSLYG 438
            N  F+LL +CK    L+K+H+LL+VHGL+ D L +TKLVSLYG
Sbjct: 86  SNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYG 129


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/96 (44%), Positives = 62/96 (64%)
 Frame = +1

Query: 151 LKPITLLHKNLPRFIISKAQLWFRTLTLLPTHQKSEHLPKIEQTLASIHSISVNQFFALL 330
           +K I+LLH++L           +R LT+       +  P+I++T+ASI SIS N  F+LL
Sbjct: 1   MKRISLLHRHLQ----------WRNLTVTAL----QRTPEIDRTIASIQSISSNPCFSLL 46

Query: 331 DLCKNKFFLQKVHSLLIVHGLTGDRLYQTKLVSLYG 438
            +CK    L+K+H+LL+VHGL+ D L +TKLVSLYG
Sbjct: 47  GICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYG 82


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