BLASTX nr result
ID: Panax21_contig00037196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00037196 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327543.1| nucleosome/chromatin assembly factor group [... 61 8e-08 ref|XP_002330494.1| nucleosome/chromatin assembly factor group [... 59 3e-07 ref|XP_003546968.1| PREDICTED: WD-40 repeat-containing protein M... 59 4e-07 ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein M... 59 4e-07 ref|XP_002282044.2| PREDICTED: WD-40 repeat-containing protein M... 59 5e-07 >ref|XP_002327543.1| nucleosome/chromatin assembly factor group [Populus trichocarpa] gi|222836097|gb|EEE74518.1| nucleosome/chromatin assembly factor group [Populus trichocarpa] Length = 465 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 2/45 (4%) Frame = -3 Query: 371 VFGSSAEDSALNLWDHKMIGQKQDHPRAK--PLPPGLFFRHSGHR 243 VFG+SAED LN+WD++ IG+KQD K PPGLFFRH+GHR Sbjct: 356 VFGTSAEDGILNIWDYEKIGKKQDSTGLKVPTAPPGLFFRHAGHR 400 >ref|XP_002330494.1| nucleosome/chromatin assembly factor group [Populus trichocarpa] gi|222872428|gb|EEF09559.1| nucleosome/chromatin assembly factor group [Populus trichocarpa] Length = 467 Score = 59.3 bits (142), Expect = 3e-07 Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 1/44 (2%) Frame = -3 Query: 371 VFGSSAEDSALNLWDHKMIGQKQDHP-RAKPLPPGLFFRHSGHR 243 VFGSSAED LN+WD++ +G+K + P RA P GLFF+H+GHR Sbjct: 358 VFGSSAEDGLLNIWDYEKVGKKTERPTRAPSSPAGLFFQHAGHR 401 >ref|XP_003546968.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] Length = 367 Score = 58.9 bits (141), Expect = 4e-07 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 2/45 (4%) Frame = -3 Query: 371 VFGSSAEDSALNLWDHKMIGQKQD--HPRAKPLPPGLFFRHSGHR 243 VFGS+AED LN+WDH +G+ D +A PPGLFFRH+GHR Sbjct: 259 VFGSTAEDGILNIWDHDKVGKTTDSASSKASNTPPGLFFRHAGHR 303 >ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] Length = 453 Score = 58.9 bits (141), Expect = 4e-07 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 2/45 (4%) Frame = -3 Query: 371 VFGSSAEDSALNLWDHKMIGQKQD--HPRAKPLPPGLFFRHSGHR 243 VFGS+AED LN+WDH +G+ D +A PPGLFFRH+GHR Sbjct: 345 VFGSTAEDGILNIWDHDKVGKTTDSADSKASNAPPGLFFRHAGHR 389 >ref|XP_002282044.2| PREDICTED: WD-40 repeat-containing protein MSI4 [Vitis vinifera] Length = 508 Score = 58.5 bits (140), Expect = 5e-07 Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 1/44 (2%) Frame = -3 Query: 371 VFGSSAEDSALNLWDHKMIGQKQD-HPRAKPLPPGLFFRHSGHR 243 VFGSSAED LN+WDH+++G+K++ PR GLFF+H+GHR Sbjct: 399 VFGSSAEDGLLNIWDHQLVGKKKEGGPRTPTSASGLFFKHAGHR 442