BLASTX nr result

ID: Panax21_contig00037155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037155
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]   102   4e-20
ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vi...   100   9e-20
ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, pa...   100   1e-19
ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vi...   100   2e-19
emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]   100   2e-19

>emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/139 (42%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = -2

Query: 376 LNENKGTEAIQGIVLDLSSSK-VNIGSQTFAKMDELRLLKLHYGCFDVSGVDIKQNHMLQ 200
           L  NKGTEA++G+V DLS+SK +N+    FAKM++LRLL+ +   F  S   + +  ++ 
Sbjct: 522 LTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLRLLRFYNCQFYGSSEYLSEKELIA 581

Query: 199 E----------------DSKVGCSGIIEFLSNELRWLCWHGYPFEFLPSTFFPESLVALD 68
                            DSK+  S   +F SN LR L WHGYP + LPS F PE LV L+
Sbjct: 582 STHDARRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELN 641

Query: 67  MSYSHIKQLWTGTKGLKRL 11
           M YS +KQLW G K  ++L
Sbjct: 642 MCYSLLKQLWEGKKAFEKL 660


>ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
           gi|296081003|emb|CBI18507.3| unnamed protein product
           [Vitis vinifera]
          Length = 1281

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
 Frame = -2

Query: 376 LNENKGTEAIQGIVLDLSSSK---VNIGSQTFAKMDELRLLKLHYGCFDVSGVDIKQNHM 206
           L    GTEAI+GI+ DLS  K   ++I +++F  M  LRLLK+++    +S         
Sbjct: 527 LIRKSGTEAIEGILFDLSIPKRKRIDITTKSFEMMTRLRLLKIYWAHGSIS--------- 577

Query: 205 LQEDSKVGCSGIIEFLSNELRWLCWHGYPFEFLPSTFFPESLVALDMSYSHIKQLWTGTK 26
           ++ED+KV  S   EF S ELR+L WHGYP E LPS+F+ E L+ LDM YS +KQLW   +
Sbjct: 578 IREDNKVKLSKDFEFPSYELRYLYWHGYPLESLPSSFYAEDLIELDMCYSSLKQLWESDE 637

Query: 25  GLKRL 11
            L++L
Sbjct: 638 PLEKL 642


>ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/139 (42%), Positives = 79/139 (56%), Gaps = 17/139 (12%)
 Frame = -2

Query: 376 LNENKGTEAIQGIVLDLSSSK-VNIGSQTFAKMDELRLLKLHYGCFDVSGVDIKQNHMLQ 200
           L  NKGTEA++G+V DLS+SK +N+    FAKM++LRLL+ +   F      + +  ++ 
Sbjct: 161 LTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLRLLRFYNFQFYGRSEYLSKKELIA 220

Query: 199 E----------------DSKVGCSGIIEFLSNELRWLCWHGYPFEFLPSTFFPESLVALD 68
                            DSK+  S   +F SN LR L WHGYP + LPS F PE LV L+
Sbjct: 221 STHDAWRWMGYDNSPYNDSKLHLSIDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELN 280

Query: 67  MSYSHIKQLWTGTKGLKRL 11
           M YS +KQLW G K  K+L
Sbjct: 281 MCYSLLKQLWEGKKAFKKL 299


>ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = -2

Query: 376 LNENKGTEAIQGIVLDLSSSK-VNIGSQTFAKMDELRLLKLHYGCFDVSGVDIKQNHMLQ 200
           L  NKGTEA++G+V DLS+SK +N+    FAKM++LRLL+ +   F  S   + +  ++ 
Sbjct: 521 LTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLRLLRFYNCQFYGSSEYLSEEELIA 580

Query: 199 E----------------DSKVGCSGIIEFLSNELRWLCWHGYPFEFLPSTFFPESLVALD 68
                            DSK+  S   +F SN LR L WHGYP + LPS F P+ LV L+
Sbjct: 581 STRDAWRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSLHWHGYPLKSLPSIFHPKKLVELN 640

Query: 67  MSYSHIKQLWTGTKGLKRL 11
           M YS +KQLW G K  ++L
Sbjct: 641 MCYSLLKQLWEGKKAFEKL 659


>emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = -2

Query: 376 LNENKGTEAIQGIVLDLSSSK-VNIGSQTFAKMDELRLLKLHYGCFDVSGVDIKQNHMLQ 200
           L  NKGTEA++G+V DLS+SK +N+    FAKM++LRLL+ +   F  S   + +  ++ 
Sbjct: 489 LTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLRLLRFYNCQFYGSSEYLSEEELIA 548

Query: 199 E----------------DSKVGCSGIIEFLSNELRWLCWHGYPFEFLPSTFFPESLVALD 68
                            DSK+  S   +F SN LR L WHGYP + LPS F P+ LV L+
Sbjct: 549 STRDAWRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSLHWHGYPLKSLPSIFHPKKLVELN 608

Query: 67  MSYSHIKQLWTGTKGLKRL 11
           M YS +KQLW G K  ++L
Sbjct: 609 MCYSLLKQLWEGKKAFEKL 627


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