BLASTX nr result

ID: Panax21_contig00037133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037133
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15384.1| AGO5 [Solanum lycopersicum]                             73   2e-11
ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...    65   5e-09
emb|CBI17106.3| unnamed protein product [Vitis vinifera]               65   5e-09
ref|XP_002984846.1| hypothetical protein SELMODRAFT_446086 [Sela...    58   1e-06
gb|EEC76346.1| hypothetical protein OsI_13926 [Oryza sativa Indi...    57   2e-06

>gb|AFV15384.1| AGO5 [Solanum lycopersicum]
          Length = 1011

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 22/109 (20%)
 Frame = +2

Query: 269 YQAPQLPSHPVASSSTSYLSREVEQKLTIEAPVLPLHQPEKP------AEPVQQPVSELP 430
           Y AP +  H   S   S ++REVEQKL+++ P    + P +P      + PVQ PV+ +P
Sbjct: 76  YNAPPMYHHQQQSMEVSSMTREVEQKLSLQ-PSTSANPPARPQPAQQSSPPVQPPVATIP 134

Query: 431 ----------------PASRKSYRIPARPGYGKEGRKCIVRANHFLVKV 529
                           P S KS R P RP  GK GRKC+VRANHFLV+V
Sbjct: 135 AHLAGPSTSTQPPRPPPVSSKSIRPPPRPDNGKLGRKCVVRANHFLVQV 183


>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 35/119 (29%)
 Frame = +2

Query: 278 PQLPSHPVASSSTSYLSREVEQKLTIEAPVLPLHQPEKPAEPVQQPVS------------ 421
           P     P AS+ST+ LS++ +Q LT+++P     QP  P  P  QP              
Sbjct: 79  PLASPSPSASTSTASLSQKFDQSLTLQSPAPVRRQPSDPVRPQPQPHPQPPPPVQAQPTP 138

Query: 422 -----------------------ELPPASRKSYRIPARPGYGKEGRKCIVRANHFLVKV 529
                                  E+PP++ K+   P RPGYG  GRKC VRANHF V+V
Sbjct: 139 PVPTQPQPSSSYQASSSSQATGVEVPPSTSKAITFPRRPGYGTVGRKCKVRANHFQVQV 197


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 35/119 (29%)
 Frame = +2

Query: 278 PQLPSHPVASSSTSYLSREVEQKLTIEAPVLPLHQPEKPAEPVQQPVS------------ 421
           P     P AS+ST+ LS++ +Q LT+++P     QP  P  P  QP              
Sbjct: 79  PLASPSPSASTSTASLSQKFDQSLTLQSPAPVRRQPSDPVRPQPQPHPQPPPPVQAQPTP 138

Query: 422 -----------------------ELPPASRKSYRIPARPGYGKEGRKCIVRANHFLVKV 529
                                  E+PP++ K+   P RPGYG  GRKC VRANHF V+V
Sbjct: 139 PVPTQPQPSSSYQASSSSQATGVEVPPSTSKAITFPRRPGYGTVGRKCKVRANHFQVQV 197


>ref|XP_002984846.1| hypothetical protein SELMODRAFT_446086 [Selaginella moellendorffii]
           gi|300147432|gb|EFJ14096.1| hypothetical protein
           SELMODRAFT_446086 [Selaginella moellendorffii]
          Length = 941

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 269 YQAPQLPSHPVASSSTSYLSREVEQ--KLTIEAPVLPLHQPEKPAEPVQQPVSELPPASR 442
           Y   Q P H         +S  VEQ   L +E  V     P +PA P  QP    PPAS 
Sbjct: 91  YHGQQQPQHQQQPRQAPAVSALVEQFSGLGVEVSV-----PAQPAPP--QPSVVAPPASI 143

Query: 443 KSYRIPARPGYGKEGRKCIVRANHFLVKV 529
           K+ R P RPG G+ G KCIV+ NHFL ++
Sbjct: 144 KALRFPLRPGRGQTGVKCIVKVNHFLAEL 172


>gb|EEC76346.1| hypothetical protein OsI_13926 [Oryza sativa Indica Group]
          Length = 1058

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
 Frame = +2

Query: 275 APQLPSHPVASSSTSYLSREVEQKLTIEAPVLPLHQPEKPAEPVQQPVSE--------LP 430
           A   PS    + S + L++E EQKL +    L    P   A     P  E        L 
Sbjct: 133 AAPAPSSSSTAPSATALAKEFEQKLFVSETALA--PPAAAASAAAAPAGEASVESDKDLA 190

Query: 431 PASRKSYRIPARPGYGKEGRKCIVRANHFLVKV 529
           P S+K    PARPG+G  G+K ++RANHFLV V
Sbjct: 191 PVSKKGLAHPARPGFGAAGKKVMIRANHFLVNV 223


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