BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037120
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]    72   1e-22
ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containi...    72   3e-22
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-13
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    60   1e-12
ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   3e-12

>emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score = 72.4 bits (176), Expect(2) = 1e-22
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = -2

Query: 148 PDEHTFPLLLKAVSRASVVSPFQFYGQIVKFGLIYDQFVQNSLVSAFAN 2
           PD HTFPLLLKA S+    +PFQFY  IVKFGL +D FVQNSLVSAFA+
Sbjct: 102 PDRHTFPLLLKAFSKLRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAH 150



 Score = 58.9 bits (141), Expect(2) = 1e-22
 Identities = 31/86 (36%), Positives = 48/86 (55%)
 Frame = -3

Query: 405 HLKQIHSLLITFAHPQNTFSFTKLLLHSLPSISNPTHRHCDISYTYSLFNHIDNPNIYLW 226
           HLKQ  S+LIT     +TF  + +L  +            D+ YT  LF+ +  P I+LW
Sbjct: 23  HLKQTTSILITSGLAHHTFFLSDILRSATK----------DLGYTLLLFDRLATPYIFLW 72

Query: 225 NVMIRAFCTSSEPQMSVVFFAKMRQN 148
           N +IR F  SS+PQM +V ++++R +
Sbjct: 73  NTIIRGFSASSQPQMVLVAYSRLRNH 98


>ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
           [Vitis vinifera] gi|296089231|emb|CBI39003.3| unnamed
           protein product [Vitis vinifera]
          Length = 601

 Score = 72.4 bits (176), Expect(2) = 3e-22
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = -2

Query: 148 PDEHTFPLLLKAVSRASVVSPFQFYGQIVKFGLIYDQFVQNSLVSAFAN 2
           PD HTFPLLLKA S+    +PFQFY  IVKFGL +D FVQNSLVSAFA+
Sbjct: 102 PDRHTFPLLLKAFSKLRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAH 150



 Score = 57.8 bits (138), Expect(2) = 3e-22
 Identities = 30/86 (34%), Positives = 48/86 (55%)
 Frame = -3

Query: 405 HLKQIHSLLITFAHPQNTFSFTKLLLHSLPSISNPTHRHCDISYTYSLFNHIDNPNIYLW 226
           HL Q  S+LIT     +TF  + LL  +            D+ YT  LF+ +  P I+LW
Sbjct: 23  HLNQTTSILITSGLAHHTFFLSDLLRSATK----------DLGYTLLLFDRLATPYIFLW 72

Query: 225 NVMIRAFCTSSEPQMSVVFFAKMRQN 148
           N ++R+F  SS+PQM +V ++++R +
Sbjct: 73  NTIVRSFSASSQPQMVLVAYSRLRNH 98


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 62.8 bits (151), Expect(2) = 1e-13
 Identities = 34/86 (39%), Positives = 48/86 (55%)
 Frame = -3

Query: 414 SVLHLKQIHSLLITFAHPQNTFSFTKLLLHSLPSISNPTHRHCDISYTYSLFNHIDNPNI 235
           S+   KQIH+ +I        F+ +KL+  S  S S       DISY  SLFN I+ PN+
Sbjct: 41  SIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSG------DISYAISLFNSIEEPNL 94

Query: 234 YLWNVMIRAFCTSSEPQMSVVFFAKM 157
           ++WN MIR    S  P +++VFF +M
Sbjct: 95  FIWNSMIRGLSMSLSPALALVFFVRM 120



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = -2

Query: 151 KPDEHTFPLLLKAVSR-ASVVSPFQFYGQIVKFGLIYDQFVQNSLVSAFA 5
           +P+ +TFP LLK+ ++ AS     Q +  ++K G + D F+  SL++ +A
Sbjct: 126 EPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYA 175


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 59.7 bits (143), Expect(2) = 1e-12
 Identities = 32/86 (37%), Positives = 51/86 (59%)
 Frame = -3

Query: 414 SVLHLKQIHSLLITFAHPQNTFSFTKLLLHSLPSISNPTHRHCDISYTYSLFNHIDNPNI 235
           S+  LKQIH+ +I  +   + F+ ++LL  S  ++SN      DI+Y   LF  I +PNI
Sbjct: 61  SMTQLKQIHAQMILTSRISDHFAASRLL--SFCALSNSR----DINYAIKLFKSIQDPNI 114

Query: 234 YLWNVMIRAFCTSSEPQMSVVFFAKM 157
           ++WN +IRA   SS P  ++ F+ +M
Sbjct: 115 FMWNTIIRALANSSNPDQALFFYIQM 140



 Score = 37.7 bits (86), Expect(2) = 1e-12
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = -2

Query: 148 PDEHTFPLLLKAVSRASVVSPFQFYGQIVKFGLIYDQFVQNSLVSAFA 5
           P+++TFP LLK  S  S+ S  Q +  ++KFG   D  V N LV  ++
Sbjct: 147 PNKYTFPFLLKGCSFCSIQSCKQIHTHVLKFGSDLDLHVVNRLVRVYS 194


>ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score = 59.3 bits (142), Expect(2) = 3e-12
 Identities = 32/82 (39%), Positives = 43/82 (52%)
 Frame = -3

Query: 402 LKQIHSLLITFAHPQNTFSFTKLLLHSLPSISNPTHRHCDISYTYSLFNHIDNPNIYLWN 223
           LKQIH+  I    P     F K L+ +L S+S P      +S+   +FN I  PNI+ WN
Sbjct: 51  LKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP------MSFAAQIFNQIQAPNIFTWN 104

Query: 222 VMIRAFCTSSEPQMSVVFFAKM 157
            MIR F  S  P  +V  F++M
Sbjct: 105 TMIRGFAESENPSPAVELFSQM 126



 Score = 37.0 bits (84), Expect(2) = 3e-12
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = -2

Query: 148 PDEHTFPLLLKAVSRASVVSPFQ-FYGQIVKFGLIYDQFVQNSLVSAFA 5
           PD HTFP L KAV++   VS  +  +  +V+ G    +FVQNSLV  ++
Sbjct: 134 PDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182