BLASTX nr result

ID: Panax21_contig00037057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037057
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27286.3| unnamed protein product [Vitis vinifera]              416   e-114
ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   416   e-114
ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   398   e-109
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   397   e-108

>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  416 bits (1068), Expect = e-114
 Identities = 205/278 (73%), Positives = 236/278 (84%), Gaps = 1/278 (0%)
 Frame = -1

Query: 920  VGDLIEASKVWNLMVDQGLEH-IDAVDKMMDTLFKTNGFDEAMKLFQSMRSKSIDVLGVS 744
            VGDLIEA+ VW+LMVD+G    IDAV+KMM+TLF  N FDEAMKLFQ++R+   D L +S
Sbjct: 220  VGDLIEAANVWDLMVDEGFRPGIDAVEKMMETLFNINRFDEAMKLFQAVRTTRFDELVLS 279

Query: 743  TYRIVIKWMCKNGKLGQAHLMFEEMQQRGIQPDNATMGSLIYGLLCKGRVGETYKIMEDI 564
            TY +VI WMCK GK+ QA+++FEEM +RGIQPDN TM SLIYGLL KGRV E  KI E I
Sbjct: 280  TYSLVIDWMCKRGKVSQAYMVFEEMLKRGIQPDNKTMSSLIYGLLAKGRVREANKITEGI 339

Query: 563  EKPDLSVYHGLIKGLLRLKRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 384
            E+PD++VYHG+IKGLLRL++A EATQVFREMI+RGCEPTMHTYIMLLQGHLGK+GRKGP 
Sbjct: 340  ERPDIAVYHGVIKGLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGKKGRKGPH 399

Query: 383  PLVNFDTIFVGGMVKAGKSLEATKYVERMLYRGQEVPRFDYNRFLHYYSNEEGVVMFEEV 204
            PLVNFD+IFVGG++K GKSL+A+KYVERM+  G EVPRFDYNRFLH YSNEEGV MFEEV
Sbjct: 400  PLVNFDSIFVGGLIKVGKSLDASKYVERMMDGGMEVPRFDYNRFLHCYSNEEGVFMFEEV 459

Query: 203  AKKLREVGLFDLADIFARYGVKMAIRDKRRDRALEP*E 90
             KKLREVGL DLADIF RYG KMA RD+RR+R  EP E
Sbjct: 460  GKKLREVGLVDLADIFLRYGEKMATRDRRRNRVAEPLE 497


>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  416 bits (1068), Expect = e-114
 Identities = 205/278 (73%), Positives = 236/278 (84%), Gaps = 1/278 (0%)
 Frame = -1

Query: 920  VGDLIEASKVWNLMVDQGLEH-IDAVDKMMDTLFKTNGFDEAMKLFQSMRSKSIDVLGVS 744
            VGDLIEA+ VW+LMVD+G    IDAV+KMM+TLF  N FDEAMKLFQ++R+   D L +S
Sbjct: 222  VGDLIEAANVWDLMVDEGFRPGIDAVEKMMETLFNINRFDEAMKLFQAVRTTRFDELVLS 281

Query: 743  TYRIVIKWMCKNGKLGQAHLMFEEMQQRGIQPDNATMGSLIYGLLCKGRVGETYKIMEDI 564
            TY +VI WMCK GK+ QA+++FEEM +RGIQPDN TM SLIYGLL KGRV E  KI E I
Sbjct: 282  TYSLVIDWMCKRGKVSQAYMVFEEMLKRGIQPDNKTMSSLIYGLLAKGRVREANKITEGI 341

Query: 563  EKPDLSVYHGLIKGLLRLKRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 384
            E+PD++VYHG+IKGLLRL++A EATQVFREMI+RGCEPTMHTYIMLLQGHLGK+GRKGP 
Sbjct: 342  ERPDIAVYHGVIKGLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGKKGRKGPH 401

Query: 383  PLVNFDTIFVGGMVKAGKSLEATKYVERMLYRGQEVPRFDYNRFLHYYSNEEGVVMFEEV 204
            PLVNFD+IFVGG++K GKSL+A+KYVERM+  G EVPRFDYNRFLH YSNEEGV MFEEV
Sbjct: 402  PLVNFDSIFVGGLIKVGKSLDASKYVERMMDGGMEVPRFDYNRFLHCYSNEEGVFMFEEV 461

Query: 203  AKKLREVGLFDLADIFARYGVKMAIRDKRRDRALEP*E 90
             KKLREVGL DLADIF RYG KMA RD+RR+R  EP E
Sbjct: 462  GKKLREVGLVDLADIFLRYGEKMATRDRRRNRVAEPLE 499


>ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|222867489|gb|EEF04620.1|
            predicted protein [Populus trichocarpa]
          Length = 502

 Score =  400 bits (1028), Expect = e-109
 Identities = 192/273 (70%), Positives = 233/273 (85%), Gaps = 1/273 (0%)
 Frame = -1

Query: 920  VGDLIEASKVWNLMVDQGLE-HIDAVDKMMDTLFKTNGFDEAMKLFQSMRSKSIDVLGVS 744
            VG+LIEASK+WNLMVD+ +E  I+  +KMM+TLFK N +DEA+K+FQ+MR   +D L +S
Sbjct: 223  VGELIEASKIWNLMVDESIEPEIEVFEKMMETLFKRNEYDEALKVFQTMRVNRMDDLALS 282

Query: 743  TYRIVIKWMCKNGKLGQAHLMFEEMQQRGIQPDNATMGSLIYGLLCKGRVGETYKIMEDI 564
            TYR+VI WMC+ GK+ QA ++F+EM+QRGIQ DN+T+GSL+YGLL +GR  E +K++E I
Sbjct: 283  TYRLVIDWMCRKGKVVQAQMVFDEMRQRGIQADNSTLGSLVYGLLTRGRHAEAHKVVERI 342

Query: 563  EKPDLSVYHGLIKGLLRLKRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 384
            EK D+SVYHGLIKGL+R +RA EATQVFREMI RGCEPTMHTYIMLLQGHLGKRGRKGPD
Sbjct: 343  EKTDISVYHGLIKGLVRSRRASEATQVFREMINRGCEPTMHTYIMLLQGHLGKRGRKGPD 402

Query: 383  PLVNFDTIFVGGMVKAGKSLEATKYVERMLYRGQEVPRFDYNRFLHYYSNEEGVVMFEEV 204
            PLVNF++IFVGG++KAGKSLEATKYVER +    EVPRFDYN+FLHYYS+EEGVVMF+EV
Sbjct: 403  PLVNFESIFVGGLIKAGKSLEATKYVERTMKGSLEVPRFDYNKFLHYYSSEEGVVMFKEV 462

Query: 203  AKKLREVGLFDLADIFARYGVKMAIRDKRRDRA 105
             KKLRE G  DLADI  RYG KMA R++RR R+
Sbjct: 463  GKKLREAGFVDLADILQRYGEKMATRERRRRRS 495


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  398 bits (1023), Expect = e-109
 Identities = 195/274 (71%), Positives = 229/274 (83%), Gaps = 1/274 (0%)
 Frame = -1

Query: 920  VGDLIEASKVWNLMVDQGLE-HIDAVDKMMDTLFKTNGFDEAMKLFQSMRSKSIDVLGVS 744
            VGDLIEASK+WNLMVD+G E  ++AV++MM+ LFKTN  DEA+KLFQ++RS  ++ L  S
Sbjct: 228  VGDLIEASKMWNLMVDEGFEPEMEAVEEMMNVLFKTNKLDEALKLFQALRSDRMNDLIPS 287

Query: 743  TYRIVIKWMCKNGKLGQAHLMFEEMQQRGIQPDNATMGSLIYGLLCKGRVGETYKIMEDI 564
            TY +VI+W+C  GK+GQA ++F+EM +RG++ DN+   SLIYGLL +GR  E Y IM  I
Sbjct: 288  TYSLVIRWLCNKGKVGQAFIVFDEMHKRGLEVDNSVHSSLIYGLLARGRRREAYNIMRRI 347

Query: 563  EKPDLSVYHGLIKGLLRLKRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 384
            E PDL VYH  IKGLL+LKRA EATQVFREMI+RGCEP MHTYIMLLQGHLGKRGRKG D
Sbjct: 348  ENPDLDVYHAFIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQGHLGKRGRKGSD 407

Query: 383  PLVNFDTIFVGGMVKAGKSLEATKYVERMLYRGQEVPRFDYNRFLHYYSNEEGVVMFEEV 204
            PLVNFD+IFVGG+VK GKSLEATKYVER++ RG EVPRFDYN+FLHYYSNEEGVVMF EV
Sbjct: 408  PLVNFDSIFVGGLVKNGKSLEATKYVERLMKRGLEVPRFDYNKFLHYYSNEEGVVMFREV 467

Query: 203  AKKLREVGLFDLADIFARYGVKMAIRDKRRDRAL 102
              KLREVGL DLADIF RYG KM  RD+RR+RA+
Sbjct: 468  GNKLREVGLVDLADIFQRYGEKMTTRDRRRNRAV 501


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g26500-like [Glycine max]
          Length = 494

 Score =  397 bits (1021), Expect = e-108
 Identities = 190/272 (69%), Positives = 231/272 (84%), Gaps = 1/272 (0%)
 Frame = -1

Query: 917  GDLIEASKVWNLMVDQGLE-HIDAVDKMMDTLFKTNGFDEAMKLFQSMRSKSIDVLGVST 741
            GDL+ ASKVWNLM D+G E  +DAV+KMM+T FK N + EA++LF++MR K ++ LG ST
Sbjct: 218  GDLVGASKVWNLMEDEGFEADVDAVEKMMETFFKVNEYGEALRLFETMRFKRMNELGAST 277

Query: 740  YRIVIKWMCKNGKLGQAHLMFEEMQQRGIQPDNATMGSLIYGLLCKGRVGETYKIMEDIE 561
            Y +VI+W+CK G + +AH +FEEM++RG++ +++T+G ++YGLL + RV E Y++ E IE
Sbjct: 278  YGLVIRWLCKKGMMARAHEVFEEMRERGVRVNDSTLGDVVYGLLTRRRVREAYRVFEGIE 337

Query: 560  KPDLSVYHGLIKGLLRLKRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 381
             PDL VYHG IKGLL+L+RA EATQVFREMI+RGCEPTMHTYIMLLQGHLG+RGRKG DP
Sbjct: 338  VPDLCVYHGFIKGLLKLRRAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGRRGRKGTDP 397

Query: 380  LVNFDTIFVGGMVKAGKSLEATKYVERMLYRGQEVPRFDYNRFLHYYSNEEGVVMFEEVA 201
            LVNFDTIFVGGMVKAGKS EATKYVER+L RG EVPRFDYN+FLHY+SNEEGV MFE+V 
Sbjct: 398  LVNFDTIFVGGMVKAGKSKEATKYVERVLNRGMEVPRFDYNKFLHYFSNEEGVHMFEDVG 457

Query: 200  KKLREVGLFDLADIFARYGVKMAIRDKRRDRA 105
            KKLREVGL DLADI  RYG KMA RD+RRDR+
Sbjct: 458  KKLREVGLVDLADILDRYGQKMATRDRRRDRS 489


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