BLASTX nr result

ID: Panax21_contig00037050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037050
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   293   2e-77
ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   283   2e-74
ref|XP_004149715.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   283   2e-74
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   279   3e-73
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              279   3e-73

>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  293 bits (750), Expect = 2e-77
 Identities = 135/184 (73%), Positives = 156/184 (84%)
 Frame = -3

Query: 615 PLKYEFYYALLRDFPDLTFTINGGINSVNEANAALKEGAHGVMVGRAAYNNPWKTLGHVD 436
           PLKYE+Y+ALLRDFPDL FTINGGIN ++E N AL+EGAHGVMVGRAA+NNPW  LGHVD
Sbjct: 192 PLKYEYYFALLRDFPDLRFTINGGINCIDEVNLALREGAHGVMVGRAAFNNPWTVLGHVD 251

Query: 435 TAVYGAPRSDLTRRQVLKQYQLYGDSVLGKYGNNKPNVRDVVKPTLGLFHSEPGNGLWKR 256
           +A+YGAP S LTRRQVL+QYQ Y D++LG YGNN+PNVRDVVKP LGLF+SEPGNGLWKR
Sbjct: 252 SAIYGAPESGLTRRQVLEQYQAYADAILGTYGNNRPNVRDVVKPLLGLFYSEPGNGLWKR 311

Query: 255 KADAAFRHCTTLKSFFEETLEAIPDRVLDEPLTEAPSSCVNTFANSKNMLPPPYRETEQE 76
           +ADAAF+ CTT+KSFFEETL AIPD VLD P+ EAPS   + F N + +LPPPY   EQ+
Sbjct: 312 RADAAFQSCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQDLFTNVRGLLPPPYATREQD 371

Query: 75  VLYA 64
           V YA
Sbjct: 372 VAYA 375


>ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Cucumis sativus]
          Length = 431

 Score =  283 bits (724), Expect = 2e-74
 Identities = 131/182 (71%), Positives = 159/182 (87%)
 Frame = -3

Query: 615 PLKYEFYYALLRDFPDLTFTINGGINSVNEANAALKEGAHGVMVGRAAYNNPWKTLGHVD 436
           PLKYE++YAL+RDFPDL FTINGGIN+V+EANAAL+ GAHGVM+GRAAY NPW+TLGHVD
Sbjct: 248 PLKYEYFYALMRDFPDLRFTINGGINTVDEANAALRLGAHGVMMGRAAYQNPWRTLGHVD 307

Query: 435 TAVYGAPRSDLTRRQVLKQYQLYGDSVLGKYGNNKPNVRDVVKPTLGLFHSEPGNGLWKR 256
           TA+YGAP S +TRRQVL+QYQ+YGDSVLG+YG NKPN+RDVVKP L LF+++PGNG WKR
Sbjct: 308 TAIYGAPSSGITRRQVLEQYQVYGDSVLGRYG-NKPNIRDVVKPLLHLFYTDPGNGPWKR 366

Query: 255 KADAAFRHCTTLKSFFEETLEAIPDRVLDEPLTEAPSSCVNTFANSKNMLPPPYRETEQE 76
           KADAAF HC T+KSFFEET+ AIPD VLD P+ E PS   + FAN+ +++PPPY + EQ+
Sbjct: 367 KADAAFMHCKTIKSFFEETIVAIPDYVLDAPVAEPPSGREDLFANTLSLMPPPYEDREQK 426

Query: 75  VL 70
           V+
Sbjct: 427 VV 428


>ref|XP_004149715.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Cucumis sativus]
          Length = 431

 Score =  283 bits (724), Expect = 2e-74
 Identities = 131/182 (71%), Positives = 159/182 (87%)
 Frame = -3

Query: 615 PLKYEFYYALLRDFPDLTFTINGGINSVNEANAALKEGAHGVMVGRAAYNNPWKTLGHVD 436
           PLKYE++YAL+RDFPDL FTINGGIN+V+EANAAL+ GAHGVM+GRAAY NPW+TLGHVD
Sbjct: 248 PLKYEYFYALMRDFPDLRFTINGGINTVDEANAALRLGAHGVMMGRAAYQNPWRTLGHVD 307

Query: 435 TAVYGAPRSDLTRRQVLKQYQLYGDSVLGKYGNNKPNVRDVVKPTLGLFHSEPGNGLWKR 256
           TA+YGAP S +TRRQVL+QYQ+YGDSVLG+YG NKPN+RDVVKP L LF+++PGNG WKR
Sbjct: 308 TAIYGAPSSGITRRQVLEQYQVYGDSVLGRYG-NKPNIRDVVKPLLHLFYTDPGNGPWKR 366

Query: 255 KADAAFRHCTTLKSFFEETLEAIPDRVLDEPLTEAPSSCVNTFANSKNMLPPPYRETEQE 76
           KADAAF HC T+KSFFEET+ AIPD VLD P+ E PS   + FAN+ +++PPPY + EQ+
Sbjct: 367 KADAAFMHCKTIKSFFEETIVAIPDYVLDAPVAEPPSGREDLFANTLSLMPPPYEDREQK 426

Query: 75  VL 70
           V+
Sbjct: 427 VV 428


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score =  279 bits (713), Expect = 3e-73
 Identities = 135/186 (72%), Positives = 157/186 (84%), Gaps = 2/186 (1%)
 Frame = -3

Query: 615 PLKYEFYYALLRDFPDLTFTINGGINSVNEANAALKEGAHGVMVGRAAYNNPWKTLGHVD 436
           PLKYE+Y+ LLRDFPDL FTINGGIN V+E NAAL++GAHGVMVGRAAY+NPW TLGHVD
Sbjct: 192 PLKYEYYFGLLRDFPDLRFTINGGINCVDEVNAALRQGAHGVMVGRAAYHNPWYTLGHVD 251

Query: 435 TAVYGAPRSDLTRRQVLKQYQLYGDSVLGKYGNNKPNVRDVVKPTLGLFHSEPGNGLWKR 256
           +AVYGAP SDL+RRQVL+QYQ+YGDSVL KYG ++P++R+VVKP L  F+SEPGNGLWKR
Sbjct: 252 SAVYGAPVSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLLHFFYSEPGNGLWKR 311

Query: 255 KADAAFRHCTTLKSFFEETLEAIPDRVLDEPLTEAPSSCVNTFANSKNMLPPPYR--ETE 82
           KADAAF HC T+KSF EETL AIPD VLD P+ +APS   + FAN  ++LP PY   E E
Sbjct: 312 KADAAFFHCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANLSDLLPLPYETSEQE 371

Query: 81  QEVLYA 64
           QEVLYA
Sbjct: 372 QEVLYA 377


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  279 bits (713), Expect = 3e-73
 Identities = 135/186 (72%), Positives = 157/186 (84%), Gaps = 2/186 (1%)
 Frame = -3

Query: 615 PLKYEFYYALLRDFPDLTFTINGGINSVNEANAALKEGAHGVMVGRAAYNNPWKTLGHVD 436
           PLKYE+Y+ LLRDFPDL FTINGGIN V+E NAAL++GAHGVMVGRAAY+NPW TLGHVD
Sbjct: 238 PLKYEYYFGLLRDFPDLRFTINGGINCVDEVNAALRQGAHGVMVGRAAYHNPWYTLGHVD 297

Query: 435 TAVYGAPRSDLTRRQVLKQYQLYGDSVLGKYGNNKPNVRDVVKPTLGLFHSEPGNGLWKR 256
           +AVYGAP SDL+RRQVL+QYQ+YGDSVL KYG ++P++R+VVKP L  F+SEPGNGLWKR
Sbjct: 298 SAVYGAPVSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLLHFFYSEPGNGLWKR 357

Query: 255 KADAAFRHCTTLKSFFEETLEAIPDRVLDEPLTEAPSSCVNTFANSKNMLPPPYR--ETE 82
           KADAAF HC T+KSF EETL AIPD VLD P+ +APS   + FAN  ++LP PY   E E
Sbjct: 358 KADAAFFHCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANLSDLLPLPYETSEQE 417

Query: 81  QEVLYA 64
           QEVLYA
Sbjct: 418 QEVLYA 423


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