BLASTX nr result

ID: Panax21_contig00037026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037026
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145927.1| PREDICTED: nuclear migration protein nudC-li...    77   9e-12
gb|ABB16978.1| salt tolerance protein 5-like protein [Solanum tu...    75   2e-11
ref|XP_002513546.1| nuclear movement protein nudc, putative [Ric...    70   9e-10
ref|XP_002321414.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|NP_001241505.1| uncharacterized protein LOC100813799 [Glycin...    67   1e-08

>ref|XP_004145927.1| PREDICTED: nuclear migration protein nudC-like [Cucumis sativus]
           gi|449525876|ref|XP_004169942.1| PREDICTED: nuclear
           migration protein nudC-like [Cucumis sativus]
          Length = 318

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3

Query: 121 AVPNNGNGLDMDNYSWGQSLQEVNINIRVPPGTKSRFVVC 2
           AVPN GNGLDMDNYSW QSLQEVN+N+ VP GTKSRFVVC
Sbjct: 148 AVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVC 187


>gb|ABB16978.1| salt tolerance protein 5-like protein [Solanum tuberosum]
          Length = 308

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -3

Query: 121 AVPNNGNGLDMDNYSWGQSLQEVNINIRVPPGTKSRFVVC 2
           A PNN NGLD++NYSWGQSLQEVN+NI VP GTKSRF+VC
Sbjct: 138 AAPNNNNGLDLENYSWGQSLQEVNVNIPVPAGTKSRFIVC 177


>ref|XP_002513546.1| nuclear movement protein nudc, putative [Ricinus communis]
           gi|223547454|gb|EEF48949.1| nuclear movement protein
           nudc, putative [Ricinus communis]
          Length = 307

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 118 VPNNGNGLDMDNYSWGQSLQEVNINIRVPPGTKSRFVVC 2
           VPN GNGLD++ YSW Q+LQEVNI + VPPGTKSRFVVC
Sbjct: 144 VPNKGNGLDLEKYSWTQTLQEVNIQVPVPPGTKSRFVVC 182


>ref|XP_002321414.1| predicted protein [Populus trichocarpa] gi|222868410|gb|EEF05541.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 118 VPNNGNGLDMDNYSWGQSLQEVNINIRVPPGTKSRFVVC 2
           VPNNGNGLD++ YSW Q+LQEVN+ I VP GTKSRFV+C
Sbjct: 13  VPNNGNGLDLEKYSWTQTLQEVNVQIPVPSGTKSRFVIC 51


>ref|NP_001241505.1| uncharacterized protein LOC100813799 [Glycine max]
           gi|255645782|gb|ACU23383.1| unknown [Glycine max]
          Length = 301

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -3

Query: 142 SLDILMSAVPNNGNGLDMDNYSWGQSLQEVNINIRVPPGTKSRFV 8
           S D   S VPN GNGLD++ YSW QSLQEVN+N+ VP GTKSRFV
Sbjct: 124 SKDESTSKVPNKGNGLDLEKYSWTQSLQEVNVNVPVPNGTKSRFV 168


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