BLASTX nr result

ID: Panax21_contig00037025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037025
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-52
emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]       207   6e-52
ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|2...   207   6e-52
gb|AAB58314.1| Cpm7 [Craterostigma plantagineum]                      200   1e-49
gb|AAM43912.1|AF510112_1 MYB transcription factor [Craterostigma...   200   1e-49

>ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|222851189|gb|EEE88736.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  209 bits (533), Expect = 1e-52
 Identities = 103/130 (79%), Positives = 106/130 (81%)
 Frame = +1

Query: 115 MDVKGEARMGIISSDVQSNEEDETMMELRRGPWTVEEDFALINYIAQHGEGRWNSLARCA 294
           MDVKG +     SS  QS+EE   M +LRRGPWTVEEDF LINYIA HGEGRWNSLARCA
Sbjct: 4   MDVKGNSNSS--SSTTQSDEE--MMGDLRRGPWTVEEDFKLINYIATHGEGRWNSLARCA 59

Query: 295 GLKRTGKSCRLRWLNYLRPDVRRGNITXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 474
           GLKRTGKSCRLRWLNYLRPDVRRGNIT          HSRWGNRWSKIAQHLPGRTDNEI
Sbjct: 60  GLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNEI 119

Query: 475 KNYWRTRVQK 504
           KNYWRTRVQK
Sbjct: 120 KNYWRTRVQK 129


>emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]
          Length = 343

 Score =  207 bits (528), Expect = 6e-52
 Identities = 103/133 (77%), Positives = 109/133 (81%), Gaps = 3/133 (2%)
 Frame = +1

Query: 115 MDVKGEARMGIISSDVQ-SNEEDET--MMELRRGPWTVEEDFALINYIAQHGEGRWNSLA 285
           MDVK     G +S  ++ S+EEDE   MM+LRRGPWTVEED AL+NYIA HGEGRWNSLA
Sbjct: 1   MDVKP----GRVSDTIRNSSEEDEDAMMMDLRRGPWTVEEDLALMNYIANHGEGRWNSLA 56

Query: 286 RCAGLKRTGKSCRLRWLNYLRPDVRRGNITXXXXXXXXXXHSRWGNRWSKIAQHLPGRTD 465
           RCAGLKRTGKSCRLRWLNYLRPDVRRGNIT          HSRWGNRWSKIAQHLPGRTD
Sbjct: 57  RCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTD 116

Query: 466 NEIKNYWRTRVQK 504
           NEIKNYWRTRVQK
Sbjct: 117 NEIKNYWRTRVQK 129


>ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|222865100|gb|EEF02231.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  207 bits (528), Expect = 6e-52
 Identities = 101/130 (77%), Positives = 107/130 (82%)
 Frame = +1

Query: 115 MDVKGEARMGIISSDVQSNEEDETMMELRRGPWTVEEDFALINYIAQHGEGRWNSLARCA 294
           MDV+G +     SS  QS+EE   M++LRRGPWTVEEDF LI+YIA HGEGRWNSLARCA
Sbjct: 1   MDVEGNSNSS--SSTTQSDEE--MMVDLRRGPWTVEEDFKLIDYIATHGEGRWNSLARCA 56

Query: 295 GLKRTGKSCRLRWLNYLRPDVRRGNITXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 474
           GLKRTGKSCRLRWLNYLRPDVRRGNIT          HSRWGNRWSKIAQHLPGRTDNEI
Sbjct: 57  GLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNEI 116

Query: 475 KNYWRTRVQK 504
           KNYWRTRVQK
Sbjct: 117 KNYWRTRVQK 126


>gb|AAB58314.1| Cpm7 [Craterostigma plantagineum]
          Length = 335

 Score =  200 bits (508), Expect = 1e-49
 Identities = 94/120 (78%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
 Frame = +1

Query: 148 ISSDVQSN-EEDETMMELRRGPWTVEEDFALINYIAQHGEGRWNSLARCAGLKRTGKSCR 324
           +S + Q N E+D+   +LRRGPWTV+EDF LINYIA HGEGRWNSLAR AGLKRTGKSCR
Sbjct: 9   VSKNKQINSEDDDDSSDLRRGPWTVDEDFTLINYIAHHGEGRWNSLARFAGLKRTGKSCR 68

Query: 325 LRWLNYLRPDVRRGNITXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK 504
           LRWLNYLRPDVRRGNIT          HSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK
Sbjct: 69  LRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK 128


>gb|AAM43912.1|AF510112_1 MYB transcription factor [Craterostigma plantagineum]
           gi|1002796|gb|AAC13876.1| myb-related transcription
           factor Cpm10 [Craterostigma plantagineum]
          Length = 333

 Score =  200 bits (508), Expect = 1e-49
 Identities = 92/118 (77%), Positives = 98/118 (83%)
 Frame = +1

Query: 151 SSDVQSNEEDETMMELRRGPWTVEEDFALINYIAQHGEGRWNSLARCAGLKRTGKSCRLR 330
           +  V + E+D+   +LRRGPWTV+EDF LINYIA HGEGRWNSLAR AGLKRTGKSCRLR
Sbjct: 12  NKQVNNCEDDDDSSDLRRGPWTVDEDFTLINYIAHHGEGRWNSLARFAGLKRTGKSCRLR 71

Query: 331 WLNYLRPDVRRGNITXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK 504
           WLNYLRPDVRRGNIT          HSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK
Sbjct: 72  WLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK 129


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