BLASTX nr result

ID: Panax21_contig00037013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00037013
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   147   1e-33
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   140   1e-31
ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   132   3e-29
ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   132   3e-29
gb|AEP25855.1| putative ring zinc finger protein [Cucumis sativus]    132   3e-29

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  147 bits (371), Expect = 1e-33
 Identities = 78/154 (50%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
 Frame = -2

Query: 470 NTPPFFHHKT---NNKVLFTAIVSLSFVVILVTLLHLYXXXXXXXXXXXXXXXXXXXXLY 300
           ++P F H  T   N+K++  AI SLSFVV+LV +LH+Y                      
Sbjct: 31  DSPLFVHRDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERANIRRLGLA- 89

Query: 299 TATAQEPSKTGLDPTVIASLPMFISKPK---AEAPTTECAICISILEDGEMVRILPNCKH 129
           TAT+ EP KTGLDP VIASLP+F+ K      E    ECA+C+S+L+D EM R LPNCKH
Sbjct: 90  TATS-EPPKTGLDPVVIASLPIFVYKQSNGDQEDNDQECAVCLSVLQDQEMARSLPNCKH 148

Query: 128 NFHAECIDNWLSANSTCPICRTEAEPQLVVQPSE 27
            FHAECID WL+++STCPICRTEAEP++  +P E
Sbjct: 149 TFHAECIDKWLTSHSTCPICRTEAEPRIQPEPRE 182


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/141 (50%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
 Frame = -2

Query: 440 NNKVLFTAIVSLSFVVILVTLLHLYXXXXXXXXXXXXXXXXXXXXLYTATAQEPSKTGLD 261
           N+K++ TAIVSLS V+ LV  LH+Y                         + EP KTGLD
Sbjct: 29  NSKIMLTAIVSLSVVIALVITLHIYARCVLRRRARRRSALLSITLS-RVHSDEPPKTGLD 87

Query: 260 PTVIASLPMFI---SKPKAEAPTTECAICISILEDGEMVRILPNCKHNFHAECIDNWLSA 90
            +VI SLPMF    +  + E  TT+CA+C+S+LE+GE+ R+LPNCKH FHAECID WL  
Sbjct: 88  QSVIDSLPMFKFSENDTQEEGGTTDCAVCLSVLEEGEIARLLPNCKHTFHAECIDKWLGT 147

Query: 89  NSTCPICRTEAEPQLVVQPSE 27
           +STCPICRTEAEP+L  +P E
Sbjct: 148 HSTCPICRTEAEPRLQPEPRE 168


>ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus]
          Length = 229

 Score =  132 bits (333), Expect = 3e-29
 Identities = 68/147 (46%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
 Frame = -2

Query: 440 NNKVLFTAIVSLSFVVILVTLLHLYXXXXXXXXXXXXXXXXXXXXLYTATAQE----PSK 273
           NNK++ TAIVSLS VVILV  LH+Y                    L    + +    PS+
Sbjct: 29  NNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSR 88

Query: 272 TGLDPTVIASLPMFISKPKAEAPT-----TECAICISILEDGEMVRILPNCKHNFHAECI 108
           +GLDP V+AS+P+ + K ++E+P       ECA+C+S + DGE  RILPNCKH FH ECI
Sbjct: 89  SGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHVECI 148

Query: 107 DNWLSANSTCPICRTEAEPQLVVQPSE 27
           D W  ++STCPICRTEA P ++ +P E
Sbjct: 149 DKWFGSHSTCPICRTEAAPMMLPEPRE 175


>ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like, partial [Cucumis
           sativus]
          Length = 255

 Score =  132 bits (333), Expect = 3e-29
 Identities = 68/147 (46%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
 Frame = -2

Query: 440 NNKVLFTAIVSLSFVVILVTLLHLYXXXXXXXXXXXXXXXXXXXXLYTATAQE----PSK 273
           NNK++ TAIVSLS VVILV  LH+Y                    L    + +    PS+
Sbjct: 55  NNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSR 114

Query: 272 TGLDPTVIASLPMFISKPKAEAPT-----TECAICISILEDGEMVRILPNCKHNFHAECI 108
           +GLDP V+AS+P+ + K ++E+P       ECA+C+S + DGE  RILPNCKH FH ECI
Sbjct: 115 SGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHVECI 174

Query: 107 DNWLSANSTCPICRTEAEPQLVVQPSE 27
           D W  ++STCPICRTEA P ++ +P E
Sbjct: 175 DKWFGSHSTCPICRTEAAPMMLPEPRE 201


>gb|AEP25855.1| putative ring zinc finger protein [Cucumis sativus]
          Length = 205

 Score =  132 bits (333), Expect = 3e-29
 Identities = 68/147 (46%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
 Frame = -2

Query: 440 NNKVLFTAIVSLSFVVILVTLLHLYXXXXXXXXXXXXXXXXXXXXLYTATAQE----PSK 273
           NNK++ TAIVSLS VVILV  LH+Y                    L    + +    PS+
Sbjct: 55  NNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSR 114

Query: 272 TGLDPTVIASLPMFISKPKAEAPT-----TECAICISILEDGEMVRILPNCKHNFHAECI 108
           +GLDP V+AS+P+ + K ++E+P       ECA+C+S + DGE  RILPNCKH FH ECI
Sbjct: 115 SGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHVECI 174

Query: 107 DNWLSANSTCPICRTEAEPQLVVQPSE 27
           D W  ++STCPICRTEA P ++ +P E
Sbjct: 175 DKWFGSHSTCPICRTEAAPMMLPEPRE 201


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