BLASTX nr result
ID: Panax21_contig00037002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00037002
(1031 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 167 7e-66
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera] 169 7e-65
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 169 3e-62
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 172 2e-61
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 165 2e-59
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 167 bits (423), Expect(5) = 7e-66
Identities = 80/175 (45%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
Frame = -2
Query: 664 CMCSDHPKKWWSWLSLAQWWYNTNYHTTLQCTHFQEFFGFFP-HLNFHQIENTRIPVVDS 488
C D PK W WL LA+WWYNTN H + + + F+ +G+ P L + T++ V++
Sbjct: 1232 CFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVEN 1291
Query: 487 FIRERSVLLVDLRGKILKAQVRMRTYKDQKRTERSFEVGDSVYLKLQLYKQSSLAQRSNF 308
++ R ++ LR + AQ RM+ + D K T RSF +GD VYL+LQ YKQ S+ QR N
Sbjct: 1292 TLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNL 1351
Query: 307 KLAPRYYGPYKVLEKLGSVAYKLDLPSHAQIHNVFYVSLLKKQIGLHARITPTMP 143
KL+PR+YGPY+VLEK+G+VAY+L+LP A+IH VF+VS LK+++G ++ T+P
Sbjct: 1352 KLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLP 1406
Score = 83.6 bits (205), Expect(5) = 7e-66
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = -1
Query: 914 TDISMDFIEVL--SSGRTVIMVIVDKFSKFTHFIGL*HPYTATTMQKCSLTTFMGYIGLP 741
TDIS+DFIE L S +VIMV+VD+ SK+ HFI + HPYTA+ + + L GLP
Sbjct: 1119 TDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLP 1178
Query: 740 QHTVTDRDEAFVSTFWQTLFK 678
VTDRD F STFW+ LFK
Sbjct: 1179 NSIVTDRDPTFTSTFWKELFK 1199
Score = 44.3 bits (103), Expect(5) = 7e-66
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -3
Query: 1026 DIKT*VKECEICQRHQTEINPYLGLLQPLEVPHKPWTD 913
+++ +KEC+ICQ++++E GLLQPL +P K WTD
Sbjct: 1083 EVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTD 1120
Score = 24.6 bits (52), Expect(5) = 7e-66
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 140 TLPPIDADGRP*IVPVAVLERRMVK 66
TLPP D DG P +L RR+ K
Sbjct: 1404 TLPPXDKDGVIRXEPEEILHRRLKK 1428
Score = 20.4 bits (41), Expect(5) = 7e-66
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -3
Query: 45 LIRWANSSKEDASW 4
L++W +++ASW
Sbjct: 1438 LVKWKGLGEDEASW 1451
>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
Length = 1360
Score = 169 bits (428), Expect(3) = 7e-65
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 1/176 (0%)
Frame = -2
Query: 664 CMCSDHPKKWWSWLSLAQWWYNTNYHTTLQCTHFQEFFGFFPHLNFHQIENTR-IPVVDS 488
C DHP+KW W+ ++ YNT+ H++ + T F+ + P + T + VD
Sbjct: 1173 CFAXDHPRKWLEWIPXXEFSYNTSIHSSTKMTXFEAVYXILPPRLLAYVPGTSXVQAVDE 1232
Query: 487 FIRERSVLLVDLRGKILKAQVRMRTYKDQKRTERSFEVGDSVYLKLQLYKQSSLAQRSNF 308
++R+R +L +LR +L+AQ RM+ DQ R + SF VGD VYLKLQ Y+Q+S+A R +
Sbjct: 1233 YLRDRDAILRELRYNLLQAQNRMKCQADQHRRDASFAVGDYVYLKLQPYRQTSVAFRGSM 1292
Query: 307 KLAPRYYGPYKVLEKLGSVAYKLDLPSHAQIHNVFYVSLLKKQIGLHARITPTMPL 140
KLAPR++GPY+V+EK+GSVAYKL LP +QIHNVF+VSLL++ +G ITPT+P+
Sbjct: 1293 KLAPRFFGPYQVIEKVGSVAYKLALPPGSQIHNVFHVSLLRRHLG---SITPTLPI 1345
Score = 85.9 bits (211), Expect(3) = 7e-65
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = -1
Query: 914 TDISMDFIEVL--SSGRTVIMVIVDKFSKFTHFIGL*HPYTATTMQKCSLTTFMGYIGLP 741
TD+SMDFIE L S+G T IMV+VD+ +K+ HFI L HP+TA T+ K + + G+P
Sbjct: 1060 TDVSMDFIEGLPSSNGYTTIMVVVDRLTKYAHFIALKHPFTAVTVAKAFVANVVRLHGIP 1119
Query: 740 QHTVTDRDEAFVSTFWQTLFK 678
V+DRD+ F+ +FWQTLF+
Sbjct: 1120 TSIVSDRDKVFLXSFWQTLFQ 1140
Score = 40.8 bits (94), Expect(3) = 7e-65
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -3
Query: 1023 IKT*VKECEICQRHQTEINPYLGLLQPLEVPHKPWTD 913
+K +++C++CQR + + LLQPL +PH+ WTD
Sbjct: 1025 VKEFLQQCDVCQRFKXDCMKPAXLLQPLPIPHQMWTD 1061
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 169 bits (429), Expect(5) = 3e-62
Identities = 85/186 (45%), Positives = 115/186 (61%), Gaps = 5/186 (2%)
Frame = -2
Query: 685 CLNN*GICMCSDHPKKWWSWLSLAQWWYNTNYHTTLQCTHFQEFFGFFPHLNFHQIENTR 506
CL + CM P+ W SW++LA+WWYNT YHT +Q T F+ +G+ P QI
Sbjct: 714 CLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPP----QISEFS 769
Query: 505 IPVVDS-----FIRERSVLLVDLRGKILKAQVRMRTYKDQKRTERSFEVGDSVYLKLQLY 341
+P S + E+ ++ L+ + AQ RM+ Y D+ RTER EVGD VYLKLQ Y
Sbjct: 770 VPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPY 829
Query: 340 KQSSLAQRSNFKLAPRYYGPYKVLEKLGSVAYKLDLPSHAQIHNVFYVSLLKKQIGLHAR 161
+Q++ R + KL +YYGP+KVLEK+G+VAY+L LP A IH VF+VS LKK +G HA
Sbjct: 830 RQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAV 889
Query: 160 ITPTMP 143
P +P
Sbjct: 890 PMPNLP 895
Score = 74.7 bits (182), Expect(5) = 3e-62
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Frame = -1
Query: 914 TDISMDFIEVL--SSGRTVIMVIVDKFSKFTHFIGL*HPYTATTMQKCSLTTFMGYIGLP 741
T ISMDF+E L S G+ VI+V+VD+ +K+ HFI L HPYT + + + G+P
Sbjct: 608 THISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMP 667
Query: 740 QHTVTDRDEAFVSTFWQTLFK----QLRY 666
VTDRD F STF+Q +FK QLR+
Sbjct: 668 IAIVTDRDRVFTSTFFQEVFKSQKVQLRF 696
Score = 33.1 bits (74), Expect(5) = 3e-62
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 1011 VKECEICQRHQTEINPYLGLLQPLEVPHKPWT 916
++ C +CQ ++E GLL PLEVP WT
Sbjct: 577 IRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWT 608
Score = 28.1 bits (61), Expect(5) = 3e-62
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 137 LPPIDADGRP*IVPVAVLERRMVKLDPRSSIS 42
LP + DG+ PVAVL+RRM+ PR++++
Sbjct: 894 LPAVGPDGQIKTEPVAVLQRRMI---PRNNVA 922
Score = 22.7 bits (47), Expect(5) = 3e-62
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 51 KYLIRWANSSKEDASWE 1
++LI W+N + +A+WE
Sbjct: 925 QWLILWSNLTPAEATWE 941
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 172 bits (435), Expect(4) = 2e-61
Identities = 79/172 (45%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Frame = -2
Query: 685 CLNN*GICMCSDHPKKWWSWLSLAQWWYNTNYHTTLQCTHFQEFFGFFPHLNFHQIEN-T 509
CL CMC D P+ W WL+LA++WYNTNYH++ + T F+ +G P ++ + +
Sbjct: 1260 CLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGES 1319
Query: 508 RIPVVDSFIRERSVLLVDLRGKILKAQVRMRTYKDQKRTERSFEVGDSVYLKLQLYKQSS 329
++ VV ++ER +L+ L+ +++AQ RM+ + DQ RTER FE+GD VY+KLQ Y+Q S
Sbjct: 1320 KVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQS 1379
Query: 328 LAQRSNFKLAPRYYGPYKVLEKLGSVAYKLDLPSHAQIHNVFYVSLLKKQIG 173
+ R+N KL+P+Y+GPYK++++ G VAYKL LPS++Q+H VF+VS LK +G
Sbjct: 1380 VVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVG 1431
Score = 75.1 bits (183), Expect(4) = 2e-61
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -1
Query: 914 TDISMDFIEVL--SSGRTVIMVIVDKFSKFTHFIGL*HPYTATTMQKCSLTTFMGYIGLP 741
+++SMDFIE L S G+TVIMV+VD+ SK HFI L HPY+A T+ L G P
Sbjct: 1154 SEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCP 1213
Query: 740 QHTVTDRDEAFVSTFWQTLF 681
V+DRD F S FW+ F
Sbjct: 1214 TSIVSDRDVVFTSEFWREFF 1233
Score = 32.0 bits (71), Expect(4) = 2e-61
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 1026 DIKT*VKECEICQRHQTEINPYLGLLQPLEVPHKPWTD 913
DI+ ++ C CQ+ +++ GLLQPL +P W++
Sbjct: 1118 DIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDTIWSE 1155
Score = 26.2 bits (56), Expect(4) = 2e-61
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 51 KYLIRWANSSKEDASWE 1
K L++W+N E+A+WE
Sbjct: 1469 KVLVKWSNEPLEEATWE 1485
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 165 bits (417), Expect(5) = 2e-59
Identities = 85/186 (45%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Frame = -2
Query: 685 CLNN*GICMCSDHPKKWWSWLSLAQWWYNTNYHTTLQCTHFQEFFGFFPHLNFHQIENTR 506
CL + M P+KW+SWL+LA+WWYNT YHT++Q T FQ +G+ P QI
Sbjct: 1370 CLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPP----QITEFA 1425
Query: 505 IPVVDS-----FIRERSVLLVDLRGKILKAQVRMRTYKDQKRTERSFEVGDSVYLKLQLY 341
IP S + +++++L L+ I +AQ R++ Y D+ R+ER+ E+GD VYLKLQ Y
Sbjct: 1426 IPCNMSEEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPY 1485
Query: 340 KQSSLAQRSNFKLAPRYYGPYKVLEKLGSVAYKLDLPSHAQIHNVFYVSLLKKQIGLHAR 161
+Q ++ R + KL +YYGP+KV+EK+G+VAYKL LP A IH VF+VS LKK +G A
Sbjct: 1486 RQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHLGARAI 1545
Query: 160 ITPTMP 143
P +P
Sbjct: 1546 PMPNLP 1551
Score = 71.6 bits (174), Expect(5) = 2e-59
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = -1
Query: 914 TDISMDFIEVL--SSGRTVIMVIVDKFSKFTHFIGL*HPYTATTMQKCSLTTFMGYIGLP 741
T I+MDFIE L S G+ VI+V+VD+ +K+ HF+ L HPYT + + + G+P
Sbjct: 1264 THITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMP 1323
Query: 740 QHTVTDRDEAFVSTFWQTLFK 678
VTDRD F S F+Q +FK
Sbjct: 1324 MVIVTDRDRVFTSNFFQEIFK 1344
Score = 33.1 bits (74), Expect(5) = 2e-59
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 1011 VKECEICQRHQTEINPYLGLLQPLEVPHKPWT 916
++EC CQ + E GLL PLEVP WT
Sbjct: 1233 IRECPTCQITKAEHIHIPGLLNPLEVPDMAWT 1264
Score = 25.4 bits (54), Expect(5) = 2e-59
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 137 LPPIDADGRP*IVPVAVLERRMV 69
LP I DG+ P AVL+RRM+
Sbjct: 1550 LPAIGPDGQIKTEPAAVLQRRMI 1572
Score = 23.5 bits (49), Expect(5) = 2e-59
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 60 PKIKYLIRWANSSKEDASWE 1
P ++LI W N + +A+WE
Sbjct: 1578 PVTQWLILWENLTPAEATWE 1597