BLASTX nr result

ID: Panax21_contig00036974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036974
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530889.1| conserved hypothetical protein [Ricinus comm...    84   3e-14
gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic s...    61   1e-07
ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER...    58   1e-06

>ref|XP_002530889.1| conserved hypothetical protein [Ricinus communis]
           gi|223529542|gb|EEF31495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1876

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/129 (36%), Positives = 71/129 (55%)
 Frame = +3

Query: 105 RMNFGRGLPISQENGNVQNRDSWLLVTPEKPISLRSNPVPVDMQGNQLGIGNWQELIGMY 284
           R++ G G  +SQ+   +Q  DSW+ VTP KPI++RSNPV +D   +QLG  NWQEL+G  
Sbjct: 4   RIHLGEGFSVSQQETELQYVDSWMPVTPNKPIAIRSNPVLIDRHESQLGSTNWQELVGFP 63

Query: 285 SDILNHDEAVQTSNPTXXXXXXXXXXXXXAAERNQHLNQNTDTYVQNLSIDNAGRCTNSL 464
           S  +  + +  +S                 AE+N+ +N    +Y + L  +N    +NSL
Sbjct: 64  SGYV-QEMSNYSSLAQHCTQIDQFTRNGSFAEKNRMINHIAGSYTRALLNENVSWSSNSL 122

Query: 465 AELLGIKNT 491
           A+LL + NT
Sbjct: 123 ADLLVMNNT 131


>gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase
           [Gossypium hirsutum]
          Length = 2055

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
 Frame = +3

Query: 108 MNFGRGLPISQENGNVQNRDSWLLVTPEKPISLRSNPVPVDMQGNQLGIGNWQEL----I 275
           MNFG    I Q     +   SW+ VTP+KPI   SNP+ V  QGNQ G  NWQE      
Sbjct: 1   MNFGEDFSIPQGK-EFEFTGSWIPVTPQKPIPTGSNPIQVSDQGNQFGKENWQEFGGFPT 59

Query: 276 GMYSDILNHDEAVQTSNPTXXXXXXXXXXXXXAAERNQHLNQNTDTYVQNLSIDNAGRCT 455
           G   DILN++    + N                A+ N+ +N    +Y   L  +++    
Sbjct: 60  GYVQDILNNNGVAHSFN------QDQYFGSINLAKNNRMINNIAGSYRLVLQNESSSWND 113

Query: 456 NSLAELLGIKN-TEIVASANGI 518
           ++ A LL  +N  +  ASAN I
Sbjct: 114 HTWANLLATRNAADGFASANRI 135


>ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 2198

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
 Frame = +3

Query: 108 MNFGRGLPISQENGNVQNRDSWLLVTPEKPISLRSNPVPVDMQGNQLGIGNWQELIGMYS 287
           MNFG+G+ ISQEN  +    +WL    +K   +RS PVPVD Q NQ G  NWQ L+G   
Sbjct: 1   MNFGKGISISQENDMLIG-GNWLPAGTDKQFLVRSQPVPVDKQVNQAGRTNWQALLGFPG 59

Query: 288 --DILNHDEAVQTSNPTXXXXXXXXXXXXXA--AERNQHLNQNTDTYVQN 425
             +  N +  VQ  N                  AE+N+ +N    +Y QN
Sbjct: 60  GHETQNCNGVVQNLNLVDLGGLSQTLYNWDGNFAEKNRLINHIAGSYNQN 109


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