BLASTX nr result

ID: Panax21_contig00036966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036966
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19832.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   169   3e-40
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39

>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = -2

Query: 418 TKFVLHDMESEQKEHVLSTHSEKLAVVFGLLKLPLGATIRVFKNLRICGDCHNAFKFMSK 239
           TKFVLHDMESEQKE+VLSTHSEKLAV FGLLKLPLGAT+RVFKNLRICGDCHNAFKFMSK
Sbjct: 457 TKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSK 516

Query: 238 AVGREIVVRDGKRFHHFKDGECSCGNYW 155
            V REIVVRDGKRFHHFK+GECSCGNYW
Sbjct: 517 VVEREIVVRDGKRFHHFKNGECSCGNYW 544


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = -2

Query: 418 TKFVLHDMESEQKEHVLSTHSEKLAVVFGLLKLPLGATIRVFKNLRICGDCHNAFKFMSK 239
           TKFVLHDMESEQKE+VLSTHSEKLAV FGLLKLPLGAT+RVFKNLRICGDCHNAFKFMSK
Sbjct: 712 TKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSK 771

Query: 238 AVGREIVVRDGKRFHHFKDGECSCGNYW 155
            V REIVVRDGKRFHHFK+GECSCGNYW
Sbjct: 772 VVEREIVVRDGKRFHHFKNGECSCGNYW 799


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479792|gb|AES60995.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = -2

Query: 418 TKFVLHDMESEQKEHVLSTHSEKLAVVFGLLKLPLGATIRVFKNLRICGDCHNAFKFMSK 239
           TKFVLHDMESE KEH LSTHSEKLAVV+G++KLPLGATIRVFKNLRICGDCHNAFK++SK
Sbjct: 708 TKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISK 767

Query: 238 AVGREIVVRDGKRFHHFKDGECSCGNYW 155
            V REIVVRD KRFHHFK+GECSCGNYW
Sbjct: 768 VVEREIVVRDRKRFHHFKNGECSCGNYW 795


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/88 (86%), Positives = 81/88 (92%)
 Frame = -2

Query: 418 TKFVLHDMESEQKEHVLSTHSEKLAVVFGLLKLPLGATIRVFKNLRICGDCHNAFKFMSK 239
           TK+VLHDMESE KE+ LSTHSEKLAV FGL+KLP GAT+RVFKNLRICGDCHNA KFMSK
Sbjct: 710 TKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSK 769

Query: 238 AVGREIVVRDGKRFHHFKDGECSCGNYW 155
            VGREIVVRDGKRFHHFK+GECSC NYW
Sbjct: 770 VVGREIVVRDGKRFHHFKNGECSCRNYW 797


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  166 bits (419), Expect = 2e-39
 Identities = 74/88 (84%), Positives = 83/88 (94%)
 Frame = -2

Query: 418 TKFVLHDMESEQKEHVLSTHSEKLAVVFGLLKLPLGATIRVFKNLRICGDCHNAFKFMSK 239
           TKFVLHDMESEQKE+ LSTHSEKLAVV+G++KLPLGATIRVFKNLRICGDCHNAFK++SK
Sbjct: 695 TKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISK 754

Query: 238 AVGREIVVRDGKRFHHFKDGECSCGNYW 155
            V REI+VRD KRFHHF++GECSC NYW
Sbjct: 755 VVDREIIVRDRKRFHHFRNGECSCSNYW 782


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