BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036939
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   2e-08
gb|ACB28472.1| polyprotein [Ananas comosus]                            62   1e-07
gb|AAX95862.1| retrotransposon protein, putative, unclassified [...    62   2e-07
ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group] g...    62   2e-07
ref|XP_003560350.1| PREDICTED: uncharacterized protein LOC100835...    62   3e-07

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = +1

Query: 436  YPYLSKVSCIILL**DIQTYIVYTISIETDRDPN-LSEFWQSLFK*V*TRLNLSTTNHLQ 612
            +PY +KV   + +   ++ + +  +SI +DRDP  +S FW+ LFK   T+L +S   H +
Sbjct: 972  HPYTAKVIADVFIREVVRLHGI-PLSIVSDRDPIFMSNFWKELFKLQGTKLKMSIAYHPE 1030

Query: 613  DNGWTMRVNQCLEPYLMCMYSHPPKLCSTWIKWQVQHLITSGQHHTA 753
             +G T  VN+CLE YL C  +  PK  ++WI W      TS  +H A
Sbjct: 1031 TDGQTEVVNRCLETYLRCFIADQPKNWASWIPWAEYWFNTS--YHAA 1075


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +1

Query: 511  SIETDRDPN-LSEFWQSLFK*V*TRLNLSTTNHLQDNGWTMRVNQCLEPYLMCMYSHPPK 687
            SI +DRD   +S+FWQ LFK +  ++NLST  H Q +G T  VN+CLE YL CM    PK
Sbjct: 839  SIVSDRDTIFVSQFWQELFKRLQVKVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPK 898

Query: 688  LCSTWIKW 711
                W KW
Sbjct: 899  ---EWAKW 903


>gb|AAX95862.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77549399|gb|ABA92196.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 332

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +1

Query: 514 IETDRDPNL-SEFWQSLFK*V*TRLNLSTTNHLQDNGWTMRVNQCLEPYLMCMYSHPPKL 690
           I +DRD    S  WQ LFK    +LN+S++ H Q +G T R+NQCLE YL C     PK 
Sbjct: 59  IISDRDKIFTSALWQELFKLADVKLNMSSSYHPQTDGQTERLNQCLEAYLRCAVHSCPKH 118

Query: 691 CSTWIKWQVQHLITSGQHHTA*NSVLAYVAYRLPHSRIP 807
            S W+  QVQH      ++TA +S L    Y +  +R P
Sbjct: 119 WSKWLS-QVQH-----WYNTAYHSALDKSPYEVLFARKP 151


>ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group]
           gi|113644753|dbj|BAF27894.1| Os11g0224300, partial
           [Oryza sativa Japonica Group]
          Length = 383

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +1

Query: 514 IETDRDPNL-SEFWQSLFK*V*TRLNLSTTNHLQDNGWTMRVNQCLEPYLMCMYSHPPKL 690
           I +DRD    S  WQ LFK    +LN+S++ H Q +G T R+NQCLE YL C     PK 
Sbjct: 110 IISDRDKIFTSALWQELFKLADVKLNMSSSYHPQTDGQTERLNQCLEAYLRCAVHSCPKH 169

Query: 691 CSTWIKWQVQHLITSGQHHTA*NSVLAYVAYRLPHSRIP 807
            S W+  QVQH      ++TA +S L    Y +  +R P
Sbjct: 170 WSKWLS-QVQH-----WYNTAYHSALDKSPYEVLFARKP 202


>ref|XP_003560350.1| PREDICTED: uncharacterized protein LOC100835480 [Brachypodium
           distachyon]
          Length = 899

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +1

Query: 511 SIETDRDPNL-SEFWQSLFK*V*TRLNLSTTNHLQDNGWTMRVNQCLEPYLMCMYSHPPK 687
           SI +DRD    S+ WQ LFK   T LNLS++ H Q NG T RVNQCLE +L C     PK
Sbjct: 647 SIISDRDKVFTSKLWQQLFKMADTTLNLSSSYHPQTNGQTERVNQCLETFLRCFVHANPK 706

Query: 688 LCSTWI 705
             ++W+
Sbjct: 707 RWASWL 712