BLASTX nr result

ID: Panax21_contig00036933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036933
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]   110   2e-22
ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]...    85   7e-15
ref|XP_002532566.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_004144589.1| PREDICTED: uncharacterized protein LOC101204...    64   1e-08
gb|AFW59496.1| hypothetical protein ZEAMMB73_561632 [Zea mays] g...    57   2e-06

>emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]
          Length = 124

 Score =  110 bits (274), Expect = 2e-22
 Identities = 65/122 (53%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
 Frame = +1

Query: 4   RPTTKTDEASYLKYLKPGALAQLRDSRISARSHRIDSQSQIYLHRTXXXXXXXXXXXXXX 183
           R ++K DEA + +YLKPGALAQLRDSRISARSHR+DS SQI+LHRT              
Sbjct: 10  RSSSKRDEAFH-RYLKPGALAQLRDSRISARSHRVDSHSQIHLHRTSSPPSSPLPPQI-- 66

Query: 184 XITSDSLPCFAGRIYGPRCPQRKKLVAAKSFFL----PPAXXXXXXXXXXXXLFSTDFLL 351
               D+ PCFAGR YGPRC QRKKLVAAKS FL    P +            LF  + L+
Sbjct: 67  ----DAFPCFAGRNYGPRCLQRKKLVAAKSVFLKSSSPASPMSESPDSVVVDLFGPEILV 122

Query: 352 AH 357
           AH
Sbjct: 123 AH 124


>ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
           gi|355486032|gb|AES67235.1| Rhomboid family member
           [Medicago truncatula]
          Length = 221

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   RRPTTKTDEASYLKYLKPGALAQLRDSRISARSHRIDSQSQIYLHR--TXXXXXXXXXXX 174
           ++ T  T    + K+LKPG LA+LRDS+I+ARSHR++S SQI ++R              
Sbjct: 2   KQRTRPTLPNHFHKFLKPGTLARLRDSKITARSHRLNSLSQISIYRPPASPPPPPPSDQP 61

Query: 175 XXXXITSDSLPCFAGRIYGPRCPQRKKLVAAKSFFLPP 288
               +++D  P F   IYGPRCPQRKKLVAAKS F  P
Sbjct: 62  QTTAVSADGFPSFFSGIYGPRCPQRKKLVAAKSVFFVP 99


>ref|XP_002532566.1| conserved hypothetical protein [Ricinus communis]
           gi|223527721|gb|EEF29827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 122

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +1

Query: 34  YLKYLKPGALAQLRDSRISARSHRIDSQSQIYLHRTXXXXXXXXXXXXXXXITSDS---- 201
           Y +YLKPGALAQLR+S+ISARSH         ++                    D     
Sbjct: 13  YYRYLKPGALAQLRNSKISARSHNKPISIISLINHPVDESSPPPMTTHHQISVGDGEQVV 72

Query: 202 LPCFAGRIYGPRCPQRKKLVAAKSFFLPPAXXXXXXXXXXXXLFSTDFLLAH 357
           +PC   + YGPRC +RKKL+AA+S F                LF+ D L+AH
Sbjct: 73  VPCLVSKTYGPRCLKRKKLMAARSVFF--LNLESADNDSSITLFNNDSLVAH 122


>ref|XP_004144589.1| PREDICTED: uncharacterized protein LOC101204134 [Cucumis sativus]
           gi|449493227|ref|XP_004159227.1| PREDICTED:
           uncharacterized protein LOC101224992 [Cucumis sativus]
          Length = 117

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/92 (41%), Positives = 53/92 (57%)
 Frame = +1

Query: 4   RPTTKTDEASYLKYLKPGALAQLRDSRISARSHRIDSQSQIYLHRTXXXXXXXXXXXXXX 183
           R +  +   ++ KYLKPGALAQ+R+SR+ AR +R++  SQIY   +              
Sbjct: 6   RRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIV 65

Query: 184 XITSDSLPCFAGRIYGPRCPQRKKLVAAKSFF 279
               D+ P FAGR YGP   QRKKL+A+KS +
Sbjct: 66  ----DASPSFAGRAYGPLSLQRKKLLASKSLW 93


>gb|AFW59496.1| hypothetical protein ZEAMMB73_561632 [Zea mays]
           gi|413919580|gb|AFW59512.1| hypothetical protein
           ZEAMMB73_126507 [Zea mays]
          Length = 133

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RRPTTKTDEASYLKYLKPGALAQLRDSRISARSHRIDSQSQIYLHRTXXXXXXXXXXXXX 180
           R P+       +L++L+PGALA+LRD R+   +      S    H               
Sbjct: 9   RSPSAAAASGDHLRFLRPGALARLRDDRLRRATRLPPPSSPAPAHAPAPASSSSPLPASG 68

Query: 181 XXITSDSLPCFA--GRIYGPRCPQRKKLVAAKSFFL 282
                 ++PCFA   R+  PRCPQRKK+ AAKS  L
Sbjct: 69  DGEGVAAVPCFAPASRLLAPRCPQRKKIAAAKSVVL 104


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