BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036906
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   165   4e-39
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar...   151   5e-35
emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]                   151   5e-35
emb|CBI19766.3| unnamed protein product [Vitis vinifera]              132   4e-29

>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355517031|gb|AES98654.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/142 (54%), Positives = 91/142 (64%)
 Frame = -1

Query: 469  KPGIRNETKESLGQSWVEVRNTVHTFFVGDQHQPNAAVLLSWINNIAGKVKRPDSHDGLY 290
            +P       + +GQSW+E  N VHTF VGDQ  P    L SW+  +A  VK   S + LY
Sbjct: 746  EPEGEKAVNKPIGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTHVSDNELY 805

Query: 289  FEEEEEDKVGGVHSEKLALAFALVGSSQTSQTIRVLKSLRMCEDCHRTIKYISKAYGREI 110
             EEEE++    VHSEKLA AFAL+      Q +R++K LRMC DCH T KYIS AYG EI
Sbjct: 806  IEEEEKENTSSVHSEKLAFAFALIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGCEI 865

Query: 109  YVSDSKCLHHFNDGHCSCGDYW 44
            Y+SDS CLHHF  GHCSC DYW
Sbjct: 866  YLSDSNCLHHFKGGHCSCRDYW 887


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/130 (56%), Positives = 96/130 (73%)
 Frame = -1

Query: 472  KKPGIRNETKESLGQSWVEVRNTVHTFFVGDQHQPNAAVLLSWINNIAGKVKRPDSHDGL 293
            +K   R+ETK+ LG SW+E +N VHTF   D+ +P    L SWI N+A KVK PD HD L
Sbjct: 754  RKSEKRSETKQPLGCSWIEAKNIVHTFVADDRSRPYFDFLHSWIENVARKVKAPDQHDRL 813

Query: 292  YFEEEEEDKVGGVHSEKLALAFALVGSSQTSQTIRVLKSLRMCEDCHRTIKYISKAYGRE 113
            + EEEE++++GGVHSEKLALAFAL+  S   +++R++K+LRMC DCH T K++S  Y  E
Sbjct: 814  FIEEEEKEEIGGVHSEKLALAFALIDPSCAPRSVRIVKNLRMCGDCHGTAKFLSMLYSCE 873

Query: 112  IYVSDSKCLH 83
            IY+SDSKCLH
Sbjct: 874  IYLSDSKCLH 883


>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g19720; AltName: Full=Protein DYW7
            gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
            [Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 894

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/144 (50%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
 Frame = -1

Query: 469  KPGIRNETKESLGQSWVEVRNTVHTFFVGDQHQPNAAVLLSWINNIAGKVKRPDSHDG-L 293
            KP   N  K+ LGQSW+EVRN +HTF  GDQ +    VL   +  ++    R D ++G L
Sbjct: 751  KPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGEL 810

Query: 292  YFEEEEEDKVGGVHSEKLALAFALVGSSQTSQT-IRVLKSLRMCEDCHRTIKYISKAYGR 116
            + EEE  ++  G+HSEK A+AF L+ SS  S+T IR+LK+LRMC DCH T KY+SK YG 
Sbjct: 811  WIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGC 870

Query: 115  EIYVSDSKCLHHFNDGHCSCGDYW 44
            +I + D++CLHHF +G CSC DYW
Sbjct: 871  DILLEDTRCLHHFKNGDCSCKDYW 894


>emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]
          Length = 406

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/144 (50%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
 Frame = -1

Query: 469 KPGIRNETKESLGQSWVEVRNTVHTFFVGDQHQPNAAVLLSWINNIAGKVKRPDSHDG-L 293
           KP   N  K+ LGQSW+EVRN +HTF  GDQ +    VL   +  ++    R D ++G L
Sbjct: 263 KPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGEL 322

Query: 292 YFEEEEEDKVGGVHSEKLALAFALVGSSQTSQT-IRVLKSLRMCEDCHRTIKYISKAYGR 116
           + EEE  ++  G+HSEK A+AF L+ SS  S+T IR+LK+LRMC DCH T KY+SK YG 
Sbjct: 323 WIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGC 382

Query: 115 EIYVSDSKCLHHFNDGHCSCGDYW 44
           +I + D++CLHHF +G CSC DYW
Sbjct: 383 DILLEDTRCLHHFKNGDCSCKDYW 406


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/98 (59%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
 Frame = -1

Query: 334 IAGKVK-RPDSHDGLYFEEEEEDKVGGVHSEKLALAFALVGSSQTSQTIRVLKSLRMCED 158
           ++GK +  PD HD L+ EEEE++++GGVHSEKLALAFAL+  S   +++R++K+LRMC D
Sbjct: 397 LSGKFEDAPDQHDRLFIEEEEKEEIGGVHSEKLALAFALIDPSCAPRSVRIVKNLRMCGD 456

Query: 157 CHRTIKYISKAYGREIYVSDSKCLHHFNDGHCSCGDYW 44
           CH T K++S  Y  EIY+SDSKCLH F +G CSCGDYW
Sbjct: 457 CHGTAKFLSMLYSCEIYLSDSKCLHWFKNGRCSCGDYW 494