BLASTX nr result

ID: Panax21_contig00036874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036874
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   375   e-129
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]   375   e-129
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              375   e-129
ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat...   355   e-120
ref|XP_002527400.1| pentatricopeptide repeat-containing protein,...   347   e-116

>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  375 bits (963), Expect(2) = e-129
 Identities = 179/246 (72%), Positives = 215/246 (87%)
 Frame = -1

Query: 743  LDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTFR 564
            +D NILVGNGLINMYTK GS KEG L FEKI  +D  SWNTM+AGYG+HGLGENA+RTF 
Sbjct: 1280 MDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFD 1339

Query: 563  QMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSKFKIEPQLEHYACTVDLLGRA 384
            QMI+ G++PDGVTFVA+LSACSHAGLV EGR+LF +M  +F++EPQ+EHYAC VDLLGRA
Sbjct: 1340 QMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRA 1399

Query: 383  GFLQEASDIVKNMPMDPNDCVLGALLNSCRMYKNTDVAQETALLIFSLDSTMTGSYMLLS 204
            G LQEAS +VK+MP++PN CV GALLNSCRM+KNT+VA+ETA  IF+L+S + GSYMLLS
Sbjct: 1400 GLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLS 1459

Query: 203  NIYSASGKWEDSAKVRISARTRGLKKIPGQSWIEVKKKVHMFSSGKSVQMGMDEVYRILK 24
            NIY+ASG+WEDSAKVRISA+T+GLKK PGQSWI+VKKKV+MFS+G +    ++EVYRILK
Sbjct: 1460 NIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILK 1519

Query: 23   NLSLQM 6
            +L LQM
Sbjct: 1520 DLGLQM 1525



 Score =  114 bits (286), Expect(2) = e-129
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = -2

Query: 982  EKLNVYPMMRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAE 803
            EK + YPM+RPN++SWSAVIGGFAS G+ EE+LELFR+MQL ++  N VTI+S+LS CAE
Sbjct: 1202 EKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE 1261

Query: 802  LSTLVLGREIHAHVIRGLMD 743
            L+ L LGREIH HV+R LMD
Sbjct: 1262 LAALHLGREIHGHVVRSLMD 1281



 Score = 67.4 bits (163), Expect(2) = 4e-16
 Identities = 36/101 (35%), Positives = 57/101 (56%)
 Frame = -1

Query: 746  GLDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTF 567
            G   N+ VGN L+ MY K G + +    FE++  R   SWNTM++GY ++     A   F
Sbjct: 1003 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMF 1062

Query: 566  RQMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSK 444
            R M  AG +P+ VT+ ++LS+ +  G   E  +LF +M+ +
Sbjct: 1063 RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMR 1103



 Score = 43.9 bits (102), Expect(2) = 4e-16
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = -2

Query: 949  NLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGREIH 770
            NL+ W++++    ++G  EE+LE++ +M+   +  +  T   ++ ACA + +  L R +H
Sbjct: 937  NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVH 996

Query: 769  AHVIRGLMDW 740
             HV+     W
Sbjct: 997  GHVVEMGFQW 1006



 Score = 57.8 bits (138), Expect(2) = 3e-14
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = -1

Query: 734  NILVGNGLINMYTKCGSLKEGYLAFEKINGRDSY--------SWNTMIAGYGMHGLGENA 579
            NI+  N LI+ Y   G   E +  F ++   D Y        SW+ +I G+   G GE A
Sbjct: 1174 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 1233

Query: 578  LRTFRQMIEAGYKPDGVTFVAILSACSHAGLVREGRKL 465
            L  FR+M  A  K + VT  ++LS C+    +  GR++
Sbjct: 1234 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 1271



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 19/69 (27%), Positives = 42/69 (60%)
 Frame = -2

Query: 958  MRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGR 779
            + PNL++W++++   A  G+  E++ELF +M++  +      ++ +LS   +L+    G+
Sbjct: 1070 LEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGK 1129

Query: 778  EIHAHVIRG 752
             IH +V++G
Sbjct: 1130 VIHGYVVKG 1138


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  375 bits (963), Expect(2) = e-129
 Identities = 179/246 (72%), Positives = 215/246 (87%)
 Frame = -1

Query: 743  LDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTFR 564
            +D NILVGNGLINMYTK GS KEG L FEKI  +D  SWNTM+AGYG+HGLGENA+RTF 
Sbjct: 442  MDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFD 501

Query: 563  QMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSKFKIEPQLEHYACTVDLLGRA 384
            QMI+ G++PDGVTFVA+LSACSHAGLV EGR+LF +M  +F++EPQ+EHYAC VDLLGRA
Sbjct: 502  QMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRA 561

Query: 383  GFLQEASDIVKNMPMDPNDCVLGALLNSCRMYKNTDVAQETALLIFSLDSTMTGSYMLLS 204
            G LQEAS +VK+MP++PN CV GALLNSCRM+KNT+VA+ETA  IF+L+S + GSYMLLS
Sbjct: 562  GLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLS 621

Query: 203  NIYSASGKWEDSAKVRISARTRGLKKIPGQSWIEVKKKVHMFSSGKSVQMGMDEVYRILK 24
            NIY+ASG+WEDSAKVRISA+T+GLKK PGQSWI+VKKKV+MFS+G +    ++EVYRILK
Sbjct: 622  NIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILK 681

Query: 23   NLSLQM 6
            +L LQM
Sbjct: 682  DLGLQM 687



 Score =  114 bits (286), Expect(2) = e-129
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = -2

Query: 982 EKLNVYPMMRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAE 803
           EK + YPM+RPN++SWSAVIGGFAS G+ EE+LELFR+MQL ++  N VTI+S+LS CAE
Sbjct: 364 EKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE 423

Query: 802 LSTLVLGREIHAHVIRGLMD 743
           L+ L LGREIH HV+R LMD
Sbjct: 424 LAALHLGREIHGHVVRSLMD 443



 Score = 67.4 bits (163), Expect(2) = 4e-16
 Identities = 36/101 (35%), Positives = 57/101 (56%)
 Frame = -1

Query: 746 GLDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTF 567
           G   N+ VGN L+ MY K G + +    FE++  R   SWNTM++GY ++     A   F
Sbjct: 165 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMF 224

Query: 566 RQMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSK 444
           R M  AG +P+ VT+ ++LS+ +  G   E  +LF +M+ +
Sbjct: 225 RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMR 265



 Score = 43.9 bits (102), Expect(2) = 4e-16
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = -2

Query: 949 NLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGREIH 770
           NL+ W++++    ++G  EE+LE++ +M+   +  +  T   ++ ACA + +  L R +H
Sbjct: 99  NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVH 158

Query: 769 AHVIRGLMDW 740
            HV+     W
Sbjct: 159 GHVVEMGFQW 168



 Score = 57.8 bits (138), Expect(2) = 3e-14
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = -1

Query: 734 NILVGNGLINMYTKCGSLKEGYLAFEKINGRDSY--------SWNTMIAGYGMHGLGENA 579
           NI+  N LI+ Y   G   E +  F ++   D Y        SW+ +I G+   G GE A
Sbjct: 336 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 395

Query: 578 LRTFRQMIEAGYKPDGVTFVAILSACSHAGLVREGRKL 465
           L  FR+M  A  K + VT  ++LS C+    +  GR++
Sbjct: 396 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 19/69 (27%), Positives = 42/69 (60%)
 Frame = -2

Query: 958 MRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGR 779
           + PNL++W++++   A  G+  E++ELF +M++  +      ++ +LS   +L+    G+
Sbjct: 232 LEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGK 291

Query: 778 EIHAHVIRG 752
            IH +V++G
Sbjct: 292 VIHGYVVKG 300


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  375 bits (963), Expect(2) = e-129
 Identities = 179/246 (72%), Positives = 215/246 (87%)
 Frame = -1

Query: 743  LDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTFR 564
            +D NILVGNGLINMYTK GS KEG L FEKI  +D  SWNTM+AGYG+HGLGENA+RTF 
Sbjct: 442  MDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFD 501

Query: 563  QMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSKFKIEPQLEHYACTVDLLGRA 384
            QMI+ G++PDGVTFVA+LSACSHAGLV EGR+LF +M  +F++EPQ+EHYAC VDLLGRA
Sbjct: 502  QMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRA 561

Query: 383  GFLQEASDIVKNMPMDPNDCVLGALLNSCRMYKNTDVAQETALLIFSLDSTMTGSYMLLS 204
            G LQEAS +VK+MP++PN CV GALLNSCRM+KNT+VA+ETA  IF+L+S + GSYMLLS
Sbjct: 562  GLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLS 621

Query: 203  NIYSASGKWEDSAKVRISARTRGLKKIPGQSWIEVKKKVHMFSSGKSVQMGMDEVYRILK 24
            NIY+ASG+WEDSAKVRISA+T+GLKK PGQSWI+VKKKV+MFS+G +    ++EVYRILK
Sbjct: 622  NIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILK 681

Query: 23   NLSLQM 6
            +L LQM
Sbjct: 682  DLGLQM 687



 Score =  114 bits (286), Expect(2) = e-129
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = -2

Query: 982 EKLNVYPMMRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAE 803
           EK + YPM+RPN++SWSAVIGGFAS G+ EE+LELFR+MQL ++  N VTI+S+LS CAE
Sbjct: 364 EKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE 423

Query: 802 LSTLVLGREIHAHVIRGLMD 743
           L+ L LGREIH HV+R LMD
Sbjct: 424 LAALHLGREIHGHVVRSLMD 443



 Score = 67.4 bits (163), Expect(2) = 4e-16
 Identities = 36/101 (35%), Positives = 57/101 (56%)
 Frame = -1

Query: 746 GLDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTF 567
           G   N+ VGN L+ MY K G + +    FE++  R   SWNTM++GY ++     A   F
Sbjct: 165 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMF 224

Query: 566 RQMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSK 444
           R M  AG +P+ VT+ ++LS+ +  G   E  +LF +M+ +
Sbjct: 225 RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMR 265



 Score = 43.9 bits (102), Expect(2) = 4e-16
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = -2

Query: 949 NLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGREIH 770
           NL+ W++++    ++G  EE+LE++ +M+   +  +  T   ++ ACA + +  L R +H
Sbjct: 99  NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVH 158

Query: 769 AHVIRGLMDW 740
            HV+     W
Sbjct: 159 GHVVEMGFQW 168



 Score = 57.8 bits (138), Expect(2) = 3e-14
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = -1

Query: 734 NILVGNGLINMYTKCGSLKEGYLAFEKINGRDSY--------SWNTMIAGYGMHGLGENA 579
           NI+  N LI+ Y   G   E +  F ++   D Y        SW+ +I G+   G GE A
Sbjct: 336 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 395

Query: 578 LRTFRQMIEAGYKPDGVTFVAILSACSHAGLVREGRKL 465
           L  FR+M  A  K + VT  ++LS C+    +  GR++
Sbjct: 396 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 19/69 (27%), Positives = 42/69 (60%)
 Frame = -2

Query: 958 MRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGR 779
           + PNL++W++++   A  G+  E++ELF +M++  +      ++ +LS   +L+    G+
Sbjct: 232 LEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGK 291

Query: 778 EIHAHVIRG 752
            IH +V++G
Sbjct: 292 VIHGYVVKG 300


>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g17630-like [Glycine max]
          Length = 696

 Score =  355 bits (910), Expect(2) = e-120
 Identities = 167/248 (67%), Positives = 206/248 (83%)
 Frame = -1

Query: 749  NGLDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRT 570
            N +  NILVGNGLINMY KCG  KEG+L F+ I GRD  SWN++I GYGMHGLGENALRT
Sbjct: 439  NMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRT 498

Query: 569  FRQMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSKFKIEPQLEHYACTVDLLG 390
            F +MI A  KPD +TFVAILSACSHAGLV  GR LF QM ++F+IEP +EHYAC VDLLG
Sbjct: 499  FNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLG 558

Query: 389  RAGFLQEASDIVKNMPMDPNDCVLGALLNSCRMYKNTDVAQETALLIFSLDSTMTGSYML 210
            RAG L+EA+DIV+NMP++PN+ V GALLNSCRMYK+ D+ +ETA  I +L S +TGS+ML
Sbjct: 559  RAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFML 618

Query: 209  LSNIYSASGKWEDSAKVRISARTRGLKKIPGQSWIEVKKKVHMFSSGKSVQMGMDEVYRI 30
            LSNIY+A+G+W+DSA+VR+SART+GLKKIPGQSWIEV+KKV+ FS+G  V  G++++Y I
Sbjct: 619  LSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVI 678

Query: 29   LKNLSLQM 6
            L+ L+L M
Sbjct: 679  LEELNLHM 686



 Score =  103 bits (258), Expect(2) = e-120
 Identities = 49/74 (66%), Positives = 61/74 (82%)
 Frame = -2

Query: 967 YPMMRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLV 788
           + ++RPN+ISWSAVI GFA  GR E+SLELFRQMQL ++M NCVTISS+LS CAEL+ L 
Sbjct: 368 HSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALN 427

Query: 787 LGREIHAHVIRGLM 746
           LGRE+H + IR +M
Sbjct: 428 LGRELHGYAIRNMM 441



 Score = 55.8 bits (133), Expect(2) = 7e-16
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
 Frame = -1

Query: 740 DSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDS----------YSWNTMIAGYGMHGL 591
           + N++  N LI+ Y + G   E Y AF  +   DS           SW+ +I+G+   G 
Sbjct: 331 NKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGR 390

Query: 590 GENALRTFRQMIEAGYKPDGVTFVAILSACSHAGLVREGRKL 465
           GE +L  FRQM  A    + VT  ++LS C+    +  GR+L
Sbjct: 391 GEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGREL 432



 Score = 54.7 bits (130), Expect(2) = 7e-16
 Identities = 21/69 (30%), Positives = 46/69 (66%)
 Frame = -2

Query: 958 MRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGR 779
           ++PN ++W++++   A  G ++E+LELF+ M+   +      ++ +LS CA+++ +  G+
Sbjct: 229 LQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGK 288

Query: 778 EIHAHVIRG 752
           EIH +V++G
Sbjct: 289 EIHGYVVKG 297



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 37/123 (30%), Positives = 66/123 (53%)
 Frame = -1

Query: 812 VCRIINTRSWSGNPCSCDQRFNGLDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSY 633
           +CRI++          C     G  +++ V N L+ MY K G +++    F+ +  R   
Sbjct: 150 LCRIVH----------CHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIV 199

Query: 632 SWNTMIAGYGMHGLGENALRTFRQMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQM 453
           SWNTM++GY ++     A R F++M   G +P+ VT+ ++LS+ +  GL  E  +LF  M
Sbjct: 200 SWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVM 259

Query: 452 KSK 444
           +++
Sbjct: 260 RTR 262


>ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533210|gb|EEF34966.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  347 bits (889), Expect(2) = e-116
 Identities = 163/245 (66%), Positives = 205/245 (83%), Gaps = 1/245 (0%)
 Frame = -1

Query: 737  SNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTFRQM 558
            +NILVGNGL+NMY KCG LKEG++ FEK   +D  SWN+MI GYGMHGLG NAL TF QM
Sbjct: 351  NNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQM 410

Query: 557  IEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSKFKIEPQLEHYACTVDLLGRAGF 378
            I+ G+KPDGVTFVA+LS+CSH+GLV EGR+LF QM  K++IEPQ+EHYAC VDLLGRAG 
Sbjct: 411  IKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGL 470

Query: 377  LQEASDIVKNMPMDPNDCVLGALLNSCRMYKNTDVAQETALLIFSLD-STMTGSYMLLSN 201
            L+EAS+IVKNMP+ PN CV GALLNSCRM+ NT++A+ETA  +F+L     TG+YMLLSN
Sbjct: 471  LREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSN 530

Query: 200  IYSASGKWEDSAKVRISARTRGLKKIPGQSWIEVKKKVHMFSSGKSVQMGMDEVYRILKN 21
            IY+ASG+WEDSA+VR SA+T+GLKK PGQSWI+V+K V+ FS+G ++Q G ++++ IL+ 
Sbjct: 531  IYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEE 590

Query: 20   LSLQM 6
            L+ QM
Sbjct: 591  LTFQM 595



 Score = 99.0 bits (245), Expect(2) = e-116
 Identities = 45/73 (61%), Positives = 60/73 (82%)
 Frame = -2

Query: 964 PMMRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVL 785
           P +RPN++SWSA+I GFAS GR +E+LELFR+MQ  +++ N VTIS++LS CAEL+ L L
Sbjct: 277 PRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHL 336

Query: 784 GREIHAHVIRGLM 746
           GREIH HV+R +M
Sbjct: 337 GREIHGHVVRAVM 349



 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 40/130 (30%), Positives = 68/130 (52%)
 Frame = -1

Query: 746 GLDSNILVGNGLINMYTKCGSLKEGYLAFEKINGRDSYSWNTMIAGYGMHGLGENALRTF 567
           G  S++ VGN LI MY K G +++    F++++ R   SWNTM++ Y  +     AL  F
Sbjct: 72  GFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIF 131

Query: 566 RQMIEAGYKPDGVTFVAILSACSHAGLVREGRKLFHQMKSKFKIEPQLEHYACTVDLLGR 387
           ++M   G +P+ VT+ +++S+ + +G   E  +LF  M+ K  +E   E  A  + +   
Sbjct: 132 QRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMK-GVEVSGEALAVVISICAD 190

Query: 386 AGFLQEASDI 357
            G    A  I
Sbjct: 191 LGAFVRAKII 200



 Score = 30.4 bits (67), Expect(2) = 1e-12
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -2

Query: 874 RQMQLTEMMPNCVTISSILSACAELSTLVLGREIHAHVI 758
           R+M+    + +  T   ++ ACA + + +LG+ IH HV+
Sbjct: 31  RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVL 69



 Score = 53.9 bits (128), Expect(2) = 1e-10
 Identities = 22/69 (31%), Positives = 44/69 (63%)
 Frame = -2

Query: 958 MRPNLISWSAVIGGFASNGRFEESLELFRQMQLTEMMPNCVTISSILSACAELSTLVLGR 779
           M PNL++W+++I  +A +G  EE++ELF  M++  +  +   ++ ++S CA+L   V  +
Sbjct: 139 MEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAK 198

Query: 778 EIHAHVIRG 752
            IH + ++G
Sbjct: 199 IIHEYAVKG 207



 Score = 38.9 bits (89), Expect(2) = 1e-10
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
 Frame = -1

Query: 719 NGLINMYTKCGSLKEGYLAFEKINGRDS--------YSWNTMIAGYGMHGLGENALRTFR 564
           N LI  + + G   E    F ++              SW+ +I G+   G  + AL  FR
Sbjct: 248 NALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFR 307

Query: 563 QMIEAGYKPDGVTFVAILSACSHAGLVREGRKL 465
           +M  A    + VT   +LS C+    +  GR++
Sbjct: 308 RMQHAKILANAVTISTVLSLCAELAALHLGREI 340


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