BLASTX nr result

ID: Panax21_contig00036773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036773
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ11964.1| MdFBX16 [Malus x domestica]                            80   4e-13
dbj|BAG07418.1| hypothetical protein [Pyrus pyrifolia] gi|316996...    79   6e-13
dbj|BAK69448.1| S-locus F-box brothers1-S6 [Pyrus pyrifolia]           79   8e-13
gb|ADE43168.1| SFBBbeta protein, partial [Pyrus communis]              78   1e-12
ref|XP_004171893.1| PREDICTED: F-box protein CPR30-like [Cucumis...    77   3e-12

>dbj|BAJ11964.1| MdFBX16 [Malus x domestica]
          Length = 400

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
 Frame = -3

Query: 597 SYFIDLGFSFDSVSSDCKVVRIGRGYDS-------------PLDVEVYSANADSWRKVEA 457
           S F  LGF +D  + + KVV+I    +              P   EVY+  A+SWR ++ 
Sbjct: 173 SIFGGLGFGYDCKAKEYKVVQIIENCEYSDDQQYYYHRIALPHTAEVYTMAANSWRVIKI 232

Query: 456 QLLVGLKRHCYGTTVKGFQYWY--DGYMSLLSFDVHNEVFSSIALPPCIEESVKTHYSGI 283
            +      +     + G+ YW+  DG   +LSFD+ +E+F  I LP  IE   +  +S I
Sbjct: 233 DISSETYHYSSSVYLNGYFYWFAIDGEKYILSFDLGDEIFHRIQLPSRIESDFE--FSNI 290

Query: 282 LEFMDSVAIFVGPYFGESKNLNRKLSKGCSLWTMDDDFGGKRSWTKKFSFNIFPKMQ-IF 106
             +  S+A F         +     S  C +W MDD  G KRSWTK  +F     ++  F
Sbjct: 291 FLYNKSIASFCSCCDPSDAD-----STLCEIWVMDDYDGVKRSWTKLLTFGPLKDIENPF 345

Query: 105 AFMETGEIVVNRNGNGLFLYDPKT 34
            F +T E+++   G     Y+  T
Sbjct: 346 TFWKTDELLMVAAGGRATTYNSST 369


>dbj|BAG07418.1| hypothetical protein [Pyrus pyrifolia] gi|316996535|dbj|BAJ52226.1|
           hypothetical protein [Pyrus pyrifolia]
          Length = 400

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
 Frame = -3

Query: 588 IDLGFSFDSVSSDCKVVRIGRGYDS-------------PLDVEVYSANADSWRKVEAQLL 448
           I LGF ++    + KVV+I    +              P   EVY+  A+SWR+++  + 
Sbjct: 176 IGLGFGYNCKPKEYKVVQIIENCEYSDDEQYYYHRIALPHTAEVYTTAANSWREIKIDIS 235

Query: 447 VGLKRHCYGTTVKGFQYWY--DGYMSLLSFDVHNEVFSSIALPPCIEESVKTHYSGILEF 274
            G         +KGF YW+  DG   +LSFD+ +E+F  I LP   E  +K  +S +   
Sbjct: 236 SGTFNCSPSAYLKGFCYWFATDGEKYILSFDLGDEIFQRIQLPSRRESDLK--FSSLFLC 293

Query: 273 MDSVAIFVGPYFGESKNLNRKLSKGCSLWTMDDDFGGKRSWTKKFSFNIFPKMQ-IFAFM 97
            +S+A F        ++     S  C +W MDD  G K SWTK  +F     ++  F F 
Sbjct: 294 KESIAAFCSCCDPSDED-----STLCEIWVMDDYDGVKSSWTKLLTFGPLKGIENPFTFW 348

Query: 96  ETGEIVVNRNGNGLFLYDPKTK 31
           ++ E+++  +G     Y+  T+
Sbjct: 349 KSDELLMVASGGRATSYNSSTR 370


>dbj|BAK69448.1| S-locus F-box brothers1-S6 [Pyrus pyrifolia]
          Length = 400

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
 Frame = -3

Query: 597 SYFIDLGFSFDSVSSDCKVVRIGRGYDS-------------PLDVEVYSANADSWRKVEA 457
           S F  LGF +D  + + KVV+I    +              P   EVY+  A+SWR ++ 
Sbjct: 173 SIFGGLGFGYDCKAKEYKVVQIIENCEYSDDQQYYYHRIALPHTAEVYTMAANSWRVIKI 232

Query: 456 QLLVGLKRHCYGTTVKGFQYWY--DGYMSLLSFDVHNEVFSSIALPPCIEESVKTHYSGI 283
            +      +     + GF YW+  DG   +LSFD+ +E+F  I LP   E   +  +S I
Sbjct: 233 DISSETYHYSSSVYMNGFFYWFANDGEKYILSFDLGDEIFHRIQLPSRRESDFE--FSNI 290

Query: 282 LEFMDSVAIFVGPYFGESKNLNRKLSKGCSLWTMDDDFGGKRSWTKKFSFNIFPKMQ-IF 106
                S+A F        ++     S  C +W MDD  G KRSWTK  +F     ++  F
Sbjct: 291 FLCNKSIASFCSCCDPSDED-----STLCEIWVMDDYDGIKRSWTKLLTFGPLKDIENPF 345

Query: 105 AFMETGEIVVNRNGNGLFLYDPKTKLRKNVGI 10
            F +T E+++   G     Y+  T+  K + I
Sbjct: 346 TFWKTDELLMVATGGRATTYNSSTRNLKYLHI 377


>gb|ADE43168.1| SFBBbeta protein, partial [Pyrus communis]
          Length = 380

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
 Frame = -3

Query: 597 SYFIDLGFSFDSVSSDCKVVRIGRGYDS-------------PLDVEVYSANADSWRKVEA 457
           S F  +GF +DS + + KVV+I    +              P   EVY    +SWR +E 
Sbjct: 168 STFQGMGFGYDSQAKEYKVVKIIENCEYSDDMRTFSHRIALPHTAEVYVTTTNSWRVIEI 227

Query: 456 QLLVGLKRHCYGTTVKGFQYWY--DGYMSLLSFDVHNEVFSSIALPPCIEESVKTHYSGI 283
           ++            +KGF YW+  D    +LSFD+ +E+F  I LP C +ES    Y   
Sbjct: 228 EISSDTYNCSCSVYLKGFCYWFASDDEEYILSFDLGDEIFHRIQLP-CRKESGFLFYDLF 286

Query: 282 LEFMDSVAIFVGPYFGESKNLNRKLSKGCSLWTMDDDFGGKRSWTKKFSFNIFPKMQ-IF 106
           L + +S+A F   Y    K+ N  + +   +W MDD  G K SWTK  +   F   + + 
Sbjct: 287 L-YSESIASFCSHY---DKSDNSGIMEILEIWVMDDCDGVKSSWTKLLTLGPFKDNENLL 342

Query: 105 AFMETGEIVVNRNGNGLFLYDPKTKLRKNVGI 10
            F ++ E+++  +      Y+  T+  K + I
Sbjct: 343 TFWKSDELLMVTSDKRAISYNSSTRNLKYIHI 374


>ref|XP_004171893.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 390

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
 Frame = -3

Query: 579 GFSFDSVSSDCKVVRIG--RG-YDSPLDVEVYSANADSWRKVEAQLLVGLKRHCYGTTV- 412
           GF + + SS+ KVVRI   RG  +  + VE+Y  N D WR++EA +  G  R      + 
Sbjct: 153 GFGYGAKSSNFKVVRIVSCRGPTEFTMRVEIYDLNKDKWREIEAPMFCGNARFIPSFLMY 212

Query: 411 -KGFQYWY-DGYMS--------LLSFDVHNEVFSSIALPPCIEESVKTHYSGILEFMDSV 262
            +G  YW+ +G  S        +++FD++ EVF  I+LP   +E  + H + +     S+
Sbjct: 213 HEGIFYWWGEGESSSSDFEGNHIITFDMNEEVFDKISLPGGYDE--RKHKTSLRVLNRSI 270

Query: 261 AIFVGPYFGESKNLNRKLSKGCSLWTMDDDFGGKRSWTKKFSFNIFPKMQI---FAFMET 91
            +F+ PY     N+         +W M+ D  G  SW K  +  I P  ++     F+  
Sbjct: 271 VLFIYPYKSNETNIGTD-ETNIDIWEMEKDEYGVVSWLKLLT--IDPPFEVEHPLLFVSY 327

Query: 90  GEIVVNRNGNGLFLYDPKTKLRKNVGI 10
            E+++  +   + +Y+ KT+L K + I
Sbjct: 328 EELLMESSEGHVIMYNTKTQLFKKLSI 354


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