BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036764
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   214   2e-75
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   206   4e-71
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   202   5e-70
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           202   2e-69
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   202   2e-69

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  214 bits (546), Expect(2) = 2e-75
 Identities = 112/251 (44%), Positives = 153/251 (60%)
 Frame = +1

Query: 49   FRPISCCNTTYKCISKILACRLKAVLPTIIRKSQSTFIKGRNISDNILLAQDLLRNYNRS 228
            +RPISCCN  YK +SK++A RLK +LP  I  +QS FIK R + +N+LLA +L+++Y++ 
Sbjct: 676  YRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKE 735

Query: 229  SGPPRCALKIDLRKAFDIVNWDFLLSSMQRFRFPPIFIRWIHSCISTAMFSIKVNGSLAG 408
            S   R ALKID+ KAFD V W FL++ ++    P +FI WI  CI TA FS++VNG L+G
Sbjct: 736  SISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSG 795

Query: 409  YFGSTRGLRQGDPLSLYLFVIVMEMLSTNLFEGAMLPDFKFHWRTKECNLTHLFFVDDIL 588
            +F S RGLRQG  LS YL+VI M +LS  L + A+     +H R +  NLTHL F DDI+
Sbjct: 796  FFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIM 855

Query: 589  VFCHAXXXXXXXXXXXXXXXXXXXGLIPNVHKNQCFMANIYQMTSTTILSLFGFQVGTLP 768
            VF                       L  ++ K+  FMA I     T+IL  F F++GTLP
Sbjct: 856  VFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLP 915

Query: 769  IKFLGPSYIIK 801
            +K+LG   + K
Sbjct: 916  VKYLGLPLLTK 926



 Score = 95.5 bits (236), Expect(2) = 2e-75
 Identities = 44/101 (43%), Positives = 68/101 (67%)
 Frame = +2

Query: 785  PLISSKLSYTDYLALIHQITSRVTSWTSIALAYSGRLQLIKSILFSIQYFWSAHFIFPKA 964
            PL++ +++ +DYL L+ +I +R+TSWT+  L+++GRLQLIKS+L SI  FW + F  PKA
Sbjct: 922  PLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKA 981

Query: 965  VSRDIQSILCRFLWKGPSLGKICACVAWNKLCLPVSGGGGG 1087
              ++I+ +   FLW GP L    A +AW+++C     GG G
Sbjct: 982  CLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLG 1022


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  206 bits (523), Expect(2) = 4e-71
 Identities = 109/251 (43%), Positives = 149/251 (59%)
 Frame = +1

Query: 49   FRPISCCNTTYKCISKILACRLKAVLPTIIRKSQSTFIKGRNISDNILLAQDLLRNYNRS 228
            +RPISCCN  YK ISKI+A RLK VLP  I  +QS F+K R + +N+LLA +L+++Y++ 
Sbjct: 529  YRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKD 588

Query: 229  SGPPRCALKIDLRKAFDIVNWDFLLSSMQRFRFPPIFIRWIHSCISTAMFSIKVNGSLAG 408
            +   RCA+KID+ KAFD V W FL++      FP  FI WI+ CI+TA FS++VNG LAG
Sbjct: 589  TISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAG 648

Query: 409  YFGSTRGLRQGDPLSLYLFVIVMEMLSTNLFEGAMLPDFKFHWRTKECNLTHLFFVDDIL 588
            YF S+RGLRQG  LS YLFVI M++LS  L + A    F +H + K   LTHL F DD++
Sbjct: 649  YFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLM 708

Query: 589  VFCHAXXXXXXXXXXXXXXXXXXXGLIPNVHKNQCFMANIYQMTSTTILSLFGFQVGTLP 768
            V                       GL  ++ K+  ++A +       +   F F  G LP
Sbjct: 709  VLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLP 768

Query: 769  IKFLGPSYIIK 801
            +++LG   I K
Sbjct: 769  VRYLGLPLITK 779



 Score = 90.1 bits (222), Expect(2) = 4e-71
 Identities = 43/101 (42%), Positives = 62/101 (61%)
 Frame = +2

Query: 785  PLISSKLSYTDYLALIHQITSRVTSWTSIALAYSGRLQLIKSILFSIQYFWSAHFIFPKA 964
            PLI+ +LS TD L L+ Q+  R+ SWTS  L+Y+GRL LI S+L+SI  FW A F  P+ 
Sbjct: 775  PLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRK 834

Query: 965  VSRDIQSILCRFLWKGPSLGKICACVAWNKLCLPVSGGGGG 1087
              R+++ +   FLW G  +    A ++W+ +C P   GG G
Sbjct: 835  CIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLG 875


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  202 bits (515), Expect(3) = 5e-70
 Identities = 104/245 (42%), Positives = 148/245 (60%)
 Frame = +1

Query: 49   FRPISCCNTTYKCISKILACRLKAVLPTIIRKSQSTFIKGRNISDNILLAQDLLRNYNRS 228
            FRPISC NT YK ISK+L  RLK  LP  I  SQS F+ GR   +N+LLA +L+  YN+ 
Sbjct: 420  FRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKK 479

Query: 229  SGPPRCALKIDLRKAFDIVNWDFLLSSMQRFRFPPIFIRWIHSCISTAMFSIKVNGSLAG 408
            +  P   LK+DLRKAFD V WDF++S+++    P  F  WI  C+STA FS+ +NG  AG
Sbjct: 480  NIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAG 539

Query: 409  YFGSTRGLRQGDPLSLYLFVIVMEMLSTNLFEGAMLPDFKFHWRTKECNLTHLFFVDDIL 588
            +F S++GLRQGDP+S YLFV+ ME+ S  L          +H +T +  ++HL F DD++
Sbjct: 540  HFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVM 599

Query: 589  VFCHAXXXXXXXXXXXXXXXXXXXGLIPNVHKNQCFMANIYQMTSTTILSLFGFQVGTLP 768
            +F                      GL+ N +K Q + A + Q  S ++ S +GF++G+LP
Sbjct: 600  IFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSMAS-YGFKLGSLP 658

Query: 769  IKFLG 783
            +++LG
Sbjct: 659  VRYLG 663



 Score = 85.1 bits (209), Expect(3) = 5e-70
 Identities = 42/101 (41%), Positives = 62/101 (61%)
 Frame = +2

Query: 785  PLISSKLSYTDYLALIHQITSRVTSWTSIALAYSGRLQLIKSILFSIQYFWSAHFIFPKA 964
            PL+S KL+  +Y  LI +IT+R  SW    L+++GR+QL+ S++  I  FW + FI P  
Sbjct: 665  PLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLG 724

Query: 965  VSRDIQSILCRFLWKGPSLGKICACVAWNKLCLPVSGGGGG 1087
              + I+S+  RFLW      K  A VAW+++CLP + GG G
Sbjct: 725  CIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIG 765



 Score = 25.4 bits (54), Expect(3) = 5e-70
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 5   IALIPKCGNPSEMSDFGP 58
           + LIPK  N S MSDF P
Sbjct: 405 LVLIPKITNASSMSDFRP 422


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  202 bits (514), Expect(2) = 2e-69
 Identities = 100/245 (40%), Positives = 148/245 (60%)
 Frame = +1

Query: 49   FRPISCCNTTYKCISKILACRLKAVLPTIIRKSQSTFIKGRNISDNILLAQDLLRNYNRS 228
            FRPISC NT YK ISK+L  RL+ +L  +I  SQS F+ GR++++N+LLA +++  YNR 
Sbjct: 383  FRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRL 442

Query: 229  SGPPRCALKIDLRKAFDIVNWDFLLSSMQRFRFPPIFIRWIHSCISTAMFSIKVNGSLAG 408
            +  PR  LK+DL+KAFD V W+F+ ++++    P  +I WIH CI+T  F+I VNG+  G
Sbjct: 443  NISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGG 502

Query: 409  YFGSTRGLRQGDPLSLYLFVIVMEMLSTNLFEGAMLPDFKFHWRTKECNLTHLFFVDDIL 588
            +F ST+GLRQGDPLS YLFV+ ME+ S  L+         +H +  + +++HL F DD++
Sbjct: 503  FFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVM 562

Query: 589  VFCHAXXXXXXXXXXXXXXXXXXXGLIPNVHKNQCFMANIYQMTSTTILSLFGFQVGTLP 768
            +F                      GL  N  K+Q F A +  ++     + +GF  GT P
Sbjct: 563  IFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFP 621

Query: 769  IKFLG 783
            I++LG
Sbjct: 622  IRYLG 626



 Score = 87.8 bits (216), Expect(2) = 2e-69
 Identities = 41/101 (40%), Positives = 63/101 (62%)
 Frame = +2

Query: 785  PLISSKLSYTDYLALIHQITSRVTSWTSIALAYSGRLQLIKSILFSIQYFWSAHFIFPKA 964
            PL+  KL   DY  L+ ++++R+ SW S AL+++GR QLI S++F +  FW + F+ PK 
Sbjct: 628  PLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKG 687

Query: 965  VSRDIQSILCRFLWKGPSLGKICACVAWNKLCLPVSGGGGG 1087
              + I+S+  +FLW G   G+  + V+W   CLP S GG G
Sbjct: 688  CIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLG 728


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  202 bits (514), Expect(2) = 2e-69
 Identities = 100/245 (40%), Positives = 148/245 (60%)
 Frame = +1

Query: 49   FRPISCCNTTYKCISKILACRLKAVLPTIIRKSQSTFIKGRNISDNILLAQDLLRNYNRS 228
            FRPISC NT YK ISK+L  RL+ +L  +I  SQS F+ GR++++N+LLA +++  YNR 
Sbjct: 383  FRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRL 442

Query: 229  SGPPRCALKIDLRKAFDIVNWDFLLSSMQRFRFPPIFIRWIHSCISTAMFSIKVNGSLAG 408
            +  PR  LK+DL+KAFD V W+F+ ++++    P  +I WIH CI+T  F+I VNG+  G
Sbjct: 443  NISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGG 502

Query: 409  YFGSTRGLRQGDPLSLYLFVIVMEMLSTNLFEGAMLPDFKFHWRTKECNLTHLFFVDDIL 588
            +F ST+GLRQGDPLS YLFV+ ME+ S  L+         +H +  + +++HL F DD++
Sbjct: 503  FFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVM 562

Query: 589  VFCHAXXXXXXXXXXXXXXXXXXXGLIPNVHKNQCFMANIYQMTSTTILSLFGFQVGTLP 768
            +F                      GL  N  K+Q F A +  ++     + +GF  GT P
Sbjct: 563  IFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFP 621

Query: 769  IKFLG 783
            I++LG
Sbjct: 622  IRYLG 626



 Score = 87.8 bits (216), Expect(2) = 2e-69
 Identities = 41/101 (40%), Positives = 63/101 (62%)
 Frame = +2

Query: 785  PLISSKLSYTDYLALIHQITSRVTSWTSIALAYSGRLQLIKSILFSIQYFWSAHFIFPKA 964
            PL+  KL   DY  L+ ++++R+ SW S AL+++GR QLI S++F +  FW + F+ PK 
Sbjct: 628  PLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKG 687

Query: 965  VSRDIQSILCRFLWKGPSLGKICACVAWNKLCLPVSGGGGG 1087
              + I+S+  +FLW G   G+  + V+W   CLP S GG G
Sbjct: 688  CIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLG 728