BLASTX nr result

ID: Panax21_contig00036707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036707
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278787.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   182   3e-44
emb|CBI27059.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|NP_172787.1| C2H2-like zinc finger protein [Arabidopsis thal...   165   4e-39
ref|XP_002892738.1| zinc finger family protein [Arabidopsis lyra...   164   5e-39
ref|XP_004140390.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   162   3e-38

>ref|XP_002278787.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Vitis vinifera]
          Length = 273

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/150 (64%), Positives = 106/150 (70%), Gaps = 5/150 (3%)
 Frame = -2

Query: 435 EADEDSILLSLAPPGQXXXXXXXXXNPRTSI-----ADQTDQVTVALHIGPPPTTNPGAT 271
           E DEDSILLSL PPGQ            +        ++ D VTVALHIGPP   N  A+
Sbjct: 21  EEDEDSILLSLCPPGQSTSKRAIYHPSSSKPQNYQNTNREDGVTVALHIGPP---NACAS 77

Query: 270 SINPNNINDNVVATTDAKYWIPTSAQILVGSTQFSCTVCNKTFNRYNNMQMHMWGHGSQY 91
           + NPNNIN       + +YWIP+ AQILVG TQFSCTVCNKTFNRYNNMQMHMWGHGSQY
Sbjct: 78  TSNPNNINGG--DPVEGQYWIPSPAQILVGPTQFSCTVCNKTFNRYNNMQMHMWGHGSQY 135

Query: 90  RKGPESLRGTKAAAASSSMLRLPCYCCAEG 1
           RKGPESLRGTK A   SS+LRLPCYCCA+G
Sbjct: 136 RKGPESLRGTKPA---SSILRLPCYCCAQG 162


>emb|CBI27059.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/150 (64%), Positives = 106/150 (70%), Gaps = 5/150 (3%)
 Frame = -2

Query: 435 EADEDSILLSLAPPGQXXXXXXXXXNPRTSI-----ADQTDQVTVALHIGPPPTTNPGAT 271
           E DEDSILLSL PPGQ            +        ++ D VTVALHIGPP   N  A+
Sbjct: 21  EEDEDSILLSLCPPGQSTSKRAIYHPSSSKPQNYQNTNREDGVTVALHIGPP---NACAS 77

Query: 270 SINPNNINDNVVATTDAKYWIPTSAQILVGSTQFSCTVCNKTFNRYNNMQMHMWGHGSQY 91
           + NPNNIN       + +YWIP+ AQILVG TQFSCTVCNKTFNRYNNMQMHMWGHGSQY
Sbjct: 78  TSNPNNINGG--DPVEGQYWIPSPAQILVGPTQFSCTVCNKTFNRYNNMQMHMWGHGSQY 135

Query: 90  RKGPESLRGTKAAAASSSMLRLPCYCCAEG 1
           RKGPESLRGTK A   SS+LRLPCYCCA+G
Sbjct: 136 RKGPESLRGTKPA---SSILRLPCYCCAQG 162


>ref|NP_172787.1| C2H2-like zinc finger protein [Arabidopsis thaliana]
           gi|9958064|gb|AAG09553.1|AC011810_12 hypothetical
           protein, similar to zinc finger proteins [Arabidopsis
           thaliana] gi|18376496|emb|CAC86166.1| WIP6 protein
           [Arabidopsis thaliana] gi|332190874|gb|AEE28995.1|
           C2H2-like zinc finger protein [Arabidopsis thaliana]
          Length = 302

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/150 (56%), Positives = 101/150 (67%), Gaps = 7/150 (4%)
 Frame = -2

Query: 429 DEDSILLSLAPPGQXXXXXXXXXNPRTSIADQTDQ-------VTVALHIGPPPTTNPGAT 271
           DEDS++LSL PPGQ         + + S   + +        VTVALHIGPP +     +
Sbjct: 12  DEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEFNHPLTNPNGVTVALHIGPPSSDKETLS 71

Query: 270 SINPNNINDNVVATTDAKYWIPTSAQILVGSTQFSCTVCNKTFNRYNNMQMHMWGHGSQY 91
             N    N   +     +YWIP+ +QILVG TQFSC+VCNKTFNR+NNMQMHMWGHGSQY
Sbjct: 72  GGN----NQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQY 127

Query: 90  RKGPESLRGTKAAAASSSMLRLPCYCCAEG 1
           RKGPESLRGTK   +SSS+LRLPCYCCAEG
Sbjct: 128 RKGPESLRGTK---SSSSILRLPCYCCAEG 154


>ref|XP_002892738.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338580|gb|EFH68997.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 303

 Score =  164 bits (416), Expect = 5e-39
 Identities = 85/150 (56%), Positives = 100/150 (66%), Gaps = 7/150 (4%)
 Frame = -2

Query: 429 DEDSILLSLAPPGQXXXXXXXXXNPRTSIADQTDQ-------VTVALHIGPPPTTNPGAT 271
           DEDS++L L PPGQ         + + S   + +        VTVALHIGPP +     T
Sbjct: 12  DEDSVVLRLGPPGQPYPSHIKPTSTKPSSDHEFNHPLTNPNGVTVALHIGPPSSDKETLT 71

Query: 270 SINPNNINDNVVATTDAKYWIPTSAQILVGSTQFSCTVCNKTFNRYNNMQMHMWGHGSQY 91
             N    N   +     +YWIP+ +QILVG TQFSC+VCNKTFNR+NNMQMHMWGHGSQY
Sbjct: 72  GGN----NQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQY 127

Query: 90  RKGPESLRGTKAAAASSSMLRLPCYCCAEG 1
           RKGPESLRGTK   +SSS+LRLPCYCCAEG
Sbjct: 128 RKGPESLRGTK---SSSSILRLPCYCCAEG 154


>ref|XP_004140390.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis sativus]
          Length = 286

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/156 (55%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
 Frame = -2

Query: 435 EADEDSILLSLAPPGQXXXXXXXXXN---PRTSIADQTDQ--------VTVALHIGPPPT 289
           E  E+SI LSL+PPGQ             P +S+ +  +         VTVA+HIGPPP 
Sbjct: 22  EEGEESIFLSLSPPGQRTSFSSKQQQTIYPNSSLQNPNNDNNHENGAAVTVAMHIGPPPA 81

Query: 288 TNPGATSINPNNINDNVVATTDAKYWIPTSAQILVGSTQFSCTVCNKTFNRYNNMQMHMW 109
                       ++    A     YWIPT AQILVG TQFSC+VC KTFNRYNNMQMHMW
Sbjct: 82  L-----------LSSTPAAVRPLDYWIPTPAQILVGPTQFSCSVCTKTFNRYNNMQMHMW 130

Query: 108 GHGSQYRKGPESLRGTKAAAASSSMLRLPCYCCAEG 1
           GHGS+YRKGPESLRG+KAA   SSMLR+PCYCCAEG
Sbjct: 131 GHGSEYRKGPESLRGSKAA---SSMLRVPCYCCAEG 163


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