BLASTX nr result

ID: Panax21_contig00036702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036702
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|1...   234   1e-59
ref|XP_002304730.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
ref|NP_001237022.1| uncharacterized protein LOC100305555 precurs...   232   6e-59
gb|ACL12053.1| blue copper-like protein [Gossypium hirsutum]          230   2e-58
ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis ...   229   6e-58

>ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|118483612|gb|ABK93701.1|
           unknown [Populus trichocarpa]
           gi|222831941|gb|EEE70418.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  234 bits (598), Expect = 1e-59
 Identities = 113/164 (68%), Positives = 131/164 (79%), Gaps = 5/164 (3%)
 Frame = -3

Query: 563 FFSFLLLIAAVS--ATDHIVGANRGWNPGVNYTLWANNHTFLVGDLISFRYQKTQYNVFE 390
           FF F +L +A++  ATDHIVGAN+GWNPG+NYT WANNHTF VGDLISFRYQKTQYNVFE
Sbjct: 10  FFCFFILFSAIATTATDHIVGANKGWNPGINYTHWANNHTFYVGDLISFRYQKTQYNVFE 69

Query: 389 VNQTGYDNCTIEGATGNWSSGKDFILLDKAKRYYFICGTGGCFNGMKVSVLVHPIPPPPA 210
           VNQTGYDNCT EGA GNW+SGKDFI L+KAKRYYFI G G CFNGMKV++LVHP+PPPP 
Sbjct: 70  VNQTGYDNCTTEGAVGNWTSGKDFIPLNKAKRYYFIGGNGQCFNGMKVTILVHPLPPPPT 129

Query: 209 S---RAKHSSTDSAAPPALLAHRGSLPVGPIVAVFISIWVGSGF 87
           S    A   S+DSAAP  L+ H+G + +  +V    SIW GSG+
Sbjct: 130 SATMAANVKSSDSAAP--LVFHKGLVGLRALVLAVASIWFGSGW 171


>ref|XP_002304730.1| predicted protein [Populus trichocarpa] gi|222842162|gb|EEE79709.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  234 bits (597), Expect = 1e-59
 Identities = 107/161 (66%), Positives = 127/161 (78%), Gaps = 2/161 (1%)
 Frame = -3

Query: 563 FFSFLLLIAAVS--ATDHIVGANRGWNPGVNYTLWANNHTFLVGDLISFRYQKTQYNVFE 390
           FF F +L +A +  ATDHIVGAN+GWNP +NYTLWANN TF VGDLISFRYQKTQYNVFE
Sbjct: 10  FFCFFILFSATATTATDHIVGANKGWNPSINYTLWANNQTFYVGDLISFRYQKTQYNVFE 69

Query: 389 VNQTGYDNCTIEGATGNWSSGKDFILLDKAKRYYFICGTGGCFNGMKVSVLVHPIPPPPA 210
           VNQTGYDNCT EGA GNW+SGKDFI L++AKRYYFICG G CFNGMKV++LVHP+PPPP+
Sbjct: 70  VNQTGYDNCTTEGALGNWTSGKDFIPLNEAKRYYFICGNGQCFNGMKVTILVHPLPPPPS 129

Query: 209 SRAKHSSTDSAAPPALLAHRGSLPVGPIVAVFISIWVGSGF 87
                +ST S +   ++ H+G + +   V  F SIW GSG+
Sbjct: 130 GSIAANSTPSGSAAPVVFHKGLVGLRAFVLAFASIWFGSGW 170


>ref|NP_001237022.1| uncharacterized protein LOC100305555 precursor [Glycine max]
           gi|255625899|gb|ACU13294.1| unknown [Glycine max]
          Length = 170

 Score =  232 bits (592), Expect = 6e-59
 Identities = 112/153 (73%), Positives = 122/153 (79%), Gaps = 2/153 (1%)
 Frame = -3

Query: 551 LLLIAAVSATDHIVGANRGWNPGVNYTLWANNHTFLVGDLISFRYQKTQYNVFEVNQTGY 372
           LL  A V+ATDHIVGANRGWNPG NYTLWANNHTF VGDLISFRYQK QYNVFEVNQTGY
Sbjct: 15  LLFSAVVTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGY 74

Query: 371 DNCTIEGATGNWSSGKDFILLDKAKRYYFICGTGGCFNGMKVSVLVHPIPPPPAS--RAK 198
           DNCT EGA GNWSSGKDFI L+KAKRYYFICG G CF+GMKVSV+VHP+PPPP S   A+
Sbjct: 75  DNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPTSAVAAQ 134

Query: 197 HSSTDSAAPPALLAHRGSLPVGPIVAVFISIWV 99
           HSS  SA+P  L     SL V  + A F  +W+
Sbjct: 135 HSSPKSASPVLLKRGFRSLLVSTVSACFGIVWI 167


>gb|ACL12053.1| blue copper-like protein [Gossypium hirsutum]
          Length = 173

 Score =  230 bits (587), Expect = 2e-58
 Identities = 109/157 (69%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
 Frame = -3

Query: 554 FLLLIAAVSATDHIVGANRGWNPGVNYTLWANNHTFLVGDLISFRYQKTQYNVFEVNQTG 375
           FLL+   V+ATDHIVGAN+GWNPG+NYTLWANN TF VGDLISFRYQKTQYNVFEVNQTG
Sbjct: 16  FLLIFGTVTATDHIVGANKGWNPGINYTLWANNQTFYVGDLISFRYQKTQYNVFEVNQTG 75

Query: 374 YDNCTIEGATGNWSSGKDFILLDKAKRYYFICGTGGCFNGMKVSVLVHPIPPPPAS-RAK 198
           YD+CT EGA GNWSSGKDFI L+++KRYYFICG G CFNGMKVSV+VHP+P P AS  A 
Sbjct: 76  YDSCTTEGAVGNWSSGKDFIPLNESKRYYFICGNGQCFNGMKVSVVVHPLPSPTASPAAS 135

Query: 197 HSSTDSAAPPALLAHRGSLPVGPIVAVFISIWVGSGF 87
           HSS  S A   ++  RG      +V    SIW GSG+
Sbjct: 136 HSSNSSNAAGLVILPRGITGFRTLVVALASIWFGSGW 172


>ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  229 bits (583), Expect = 6e-58
 Identities = 110/140 (78%), Positives = 120/140 (85%), Gaps = 7/140 (5%)
 Frame = -3

Query: 569 VPFFSFLLLIAAVS-----ATDHIVGANRGWNPGVNYTLWANNHTFLVGDLISFRYQKTQ 405
           +PFF  LLL AAVS     ATDHIVGANRGWNPG+NYTLWANNHTF VGDLISFRYQK Q
Sbjct: 8   LPFF--LLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQ 65

Query: 404 YNVFEVNQTGYDNCTIEGATGNWSSGKDFILLDKAKRYYFICGTGGCFNGMKVSVLVHPI 225
           YNVFEVNQTGYDNCTIEGA+GNWSSGKDFI LDKA+RYYFICG G CFNGMKV++LVHP+
Sbjct: 66  YNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPL 125

Query: 224 PPPPAS--RAKHSSTDSAAP 171
           PPPP+S    +H+S  SA P
Sbjct: 126 PPPPSSPLAMEHNSPSSATP 145


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