BLASTX nr result
ID: Panax21_contig00036685
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00036685 (785 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2... 313 3e-83 ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm... 301 1e-79 ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm... 300 3e-79 ref|XP_002871294.1| mitochondrial transcription termination fact... 280 3e-73 ref|NP_568185.1| Mitochondrial transcription termination factor ... 279 6e-73 >ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1| predicted protein [Populus trichocarpa] Length = 400 Score = 313 bits (802), Expect = 3e-83 Identities = 149/220 (67%), Positives = 178/220 (80%) Frame = +1 Query: 1 LKSNEKVVAATRRTTWIFLEDYTKNLEPNIVVLRGVGVPESCIILLLTHFPEAVMLKHDR 180 L+S+EK+V+A +RTTWIFLED +KNL PN+ +LR VGVP+SCI LLLTHFPEA+M H+ Sbjct: 176 LRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEE 235 Query: 181 FKETVAKVKGMGFDPMKSQFVLAVHVFSGEGNKSIWDRCCEVYKNWGWSEDDILMAFRKQ 360 F E V +V+ MGFDP KS FVLAVH G+ NKSIW+RC EVYK WGW++DDIL AFRK Sbjct: 236 FSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKH 295 Query: 361 PNCMILSEKKITKAMDFLVNKMGWPSRVIASCPAVLLFSLEKRIIPRCYVIQALSVKDLI 540 P+CM+LSEKKI K +DF VNKMGWPS+ I CP +L SLEKRIIPRC VIQ L K LI Sbjct: 296 PHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWSKGLI 355 Query: 541 KKDVSLLTVMIPAEKYFLERFVTKYEEELPQLWGVYQGEV 660 KKD+SL TV++P EK FLERFVTK+EEE+PQL VY+G+V Sbjct: 356 KKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVYEGKV 395 >ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis] gi|223540049|gb|EEF41626.1| conserved hypothetical protein [Ricinus communis] Length = 406 Score = 301 bits (771), Expect = 1e-79 Identities = 143/224 (63%), Positives = 180/224 (80%) Frame = +1 Query: 1 LKSNEKVVAATRRTTWIFLEDYTKNLEPNIVVLRGVGVPESCIILLLTHFPEAVMLKHDR 180 L S+EK+V+A +RTTWIFLED++KNL PNI +LR GV SCI LLLTHFPEA+M +HD+ Sbjct: 177 LLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLREAGVLHSCISLLLTHFPEALMQRHDK 236 Query: 181 FKETVAKVKGMGFDPMKSQFVLAVHVFSGEGNKSIWDRCCEVYKNWGWSEDDILMAFRKQ 360 F + V +V+ M FDP KS FVLAVH SG+GNKSIW++C EVY WGWS+DDI AF+K Sbjct: 237 FSKIVKEVREMEFDPKKSTFVLAVHAISGKGNKSIWNKCFEVYMRWGWSKDDIFAAFKKH 296 Query: 361 PNCMILSEKKITKAMDFLVNKMGWPSRVIASCPAVLLFSLEKRIIPRCYVIQALSVKDLI 540 P+CM+LSEKKI KAMDF VNKMG+PS+VIA CP VL FSLEKRI+PRC VI+ L K L+ Sbjct: 297 PHCMMLSEKKIMKAMDFFVNKMGFPSKVIAQCPVVLFFSLEKRIVPRCRVIRVLMNKRLV 356 Query: 541 KKDVSLLTVMIPAEKYFLERFVTKYEEELPQLWGVYQGEVHVSE 672 K+DVSL +V++P E+ FL+RFVT++ EE+P+L VY+G+ V E Sbjct: 357 KEDVSLASVLLPVEQCFLDRFVTRFAEEIPRLLSVYEGKRDVEE 400 >ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis] gi|223540048|gb|EEF41625.1| conserved hypothetical protein [Ricinus communis] Length = 377 Score = 300 bits (767), Expect = 3e-79 Identities = 143/222 (64%), Positives = 175/222 (78%) Frame = +1 Query: 1 LKSNEKVVAATRRTTWIFLEDYTKNLEPNIVVLRGVGVPESCIILLLTHFPEAVMLKHDR 180 L SNEK+V+A +RTTWIFLEDY+KNL PN+ LR +GV SCI LLLT+FPEAV+ +H Sbjct: 152 LLSNEKIVSALKRTTWIFLEDYSKNLMPNVERLREIGVTHSCISLLLTNFPEAVLQRHGE 211 Query: 181 FKETVAKVKGMGFDPMKSQFVLAVHVFSGEGNKSIWDRCCEVYKNWGWSEDDILMAFRKQ 360 F + V +VK MGFDP KS FV+AVH SG+ NK+IW++C EVYK W WS+DDI AF+K Sbjct: 212 FNKVVKEVKEMGFDPKKSIFVMAVHAISGKSNKAIWNKCFEVYKRWDWSKDDIFAAFKKH 271 Query: 361 PNCMILSEKKITKAMDFLVNKMGWPSRVIASCPAVLLFSLEKRIIPRCYVIQALSVKDLI 540 P+CM+LSEKKI AMDF VNKMG PS+VIA CP +L FSLEKRI+PRC VI+ L K L+ Sbjct: 272 PHCMMLSEKKIMLAMDFFVNKMGLPSKVIAQCPVLLFFSLEKRIVPRCRVIRVLMNKGLV 331 Query: 541 KKDVSLLTVMIPAEKYFLERFVTKYEEELPQLWGVYQGEVHV 666 KKDVSL TV++P EK FL+RFV KYEEE+P L VY+G++ V Sbjct: 332 KKDVSLATVLVPTEKCFLDRFVIKYEEEVPLLLRVYEGKIDV 373 >ref|XP_002871294.1| mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297317131|gb|EFH47553.1| mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata] Length = 404 Score = 280 bits (715), Expect = 3e-73 Identities = 133/218 (61%), Positives = 163/218 (74%) Frame = +1 Query: 1 LKSNEKVVAATRRTTWIFLEDYTKNLEPNIVVLRGVGVPESCIILLLTHFPEAVMLKHDR 180 L S+EK+VAA RRTTW+FLED+TKNL PNI + GVPE CI LLLTHFPEAVM K Sbjct: 183 LDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMSETGVPEKCIKLLLTHFPEAVMQKSHE 242 Query: 181 FKETVAKVKGMGFDPMKSQFVLAVHVFSGEGNKSIWDRCCEVYKNWGWSEDDILMAFRKQ 360 F+ + + MGF+P KS FVLA+H SG+GNKSIWD+C EVY+ WGWSEDDI+ AF+K Sbjct: 243 FQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKH 302 Query: 361 PNCMILSEKKITKAMDFLVNKMGWPSRVIASCPAVLLFSLEKRIIPRCYVIQALSVKDLI 540 P+CM+LSE+KI + M+F VN+M R IA CP VL FSLEKRIIPRC V + L L+ Sbjct: 303 PHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGLV 362 Query: 541 KKDVSLLTVMIPAEKYFLERFVTKYEEELPQLWGVYQG 654 K+D SL ++++P EK FLE+ V KYEEELP+L VY G Sbjct: 363 KEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDVYLG 400 >ref|NP_568185.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1| putative protein [Arabidopsis thaliana] gi|10176724|dbj|BAB09954.1| unnamed protein product [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1| unknown protein [Arabidopsis thaliana] gi|21592327|gb|AAM64278.1| unknown [Arabidopsis thaliana] gi|332003836|gb|AED91219.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 405 Score = 279 bits (713), Expect = 6e-73 Identities = 131/218 (60%), Positives = 164/218 (75%) Frame = +1 Query: 1 LKSNEKVVAATRRTTWIFLEDYTKNLEPNIVVLRGVGVPESCIILLLTHFPEAVMLKHDR 180 L S+EK+VAA RRTTW+FLED+TKNL PNI + GVPE CI LLLTHFPEAVM K+ Sbjct: 184 LDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHE 243 Query: 181 FKETVAKVKGMGFDPMKSQFVLAVHVFSGEGNKSIWDRCCEVYKNWGWSEDDILMAFRKQ 360 F+ + + MGF+P KS FVLA+H SG+GNKSIWD+C EVY+ WGWSEDDI+ AF+K Sbjct: 244 FQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKH 303 Query: 361 PNCMILSEKKITKAMDFLVNKMGWPSRVIASCPAVLLFSLEKRIIPRCYVIQALSVKDLI 540 P+CM+LSE+KI + M++ VN+M R IA CP VL FSLEKRIIPRC V + L L+ Sbjct: 304 PHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLV 363 Query: 541 KKDVSLLTVMIPAEKYFLERFVTKYEEELPQLWGVYQG 654 K+D SL ++++P EK FLE+ V KYEEELP+L +Y G Sbjct: 364 KEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401