BLASTX nr result

ID: Panax21_contig00036682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036682
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518104.1| transcription factor, putative [Ricinus comm...   125   3e-27
emb|CAN66720.1| hypothetical protein VITISV_027098 [Vitis vinifera]   122   2e-26
ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250...   122   4e-26
gb|ABK94861.1| unknown [Populus trichocarpa]                          121   5e-26
emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa] ...   120   9e-26

>ref|XP_002518104.1| transcription factor, putative [Ricinus communis]
           gi|223542700|gb|EEF44237.1| transcription factor,
           putative [Ricinus communis]
          Length = 303

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/103 (63%), Positives = 80/103 (77%), Gaps = 6/103 (5%)
 Frame = -1

Query: 414 SELAIKVANDCQQV-----MAVPSLSEVAASLESKNAINVPARIGDFSVDSCLTSNGSPV 250
           SELAIKV+N+CQ +     M +PSLSE+A +LESK+  N+PARIGD SV+SCLTS GSPV
Sbjct: 200 SELAIKVSNECQGIVPADNMKMPSLSELAVALESKSTSNLPARIGDCSVESCLTSTGSPV 259

Query: 249 SPTGVGSQAAALKKRRRPLFSNGDLSPLDSNSRQ-VEWIMSNI 124
           SP GVGS  A++KKR RP+F NGD  PL+ + RQ VEW+M NI
Sbjct: 260 SPMGVGSHTASIKKRPRPIFGNGDSLPLEGSMRQEVEWMMGNI 302


>emb|CAN66720.1| hypothetical protein VITISV_027098 [Vitis vinifera]
          Length = 250

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 6/103 (5%)
 Frame = -1

Query: 414 SELAIKVANDCQ-----QVMAVPSLSEVAASLESKNAINVPARIGDFSVDSCLTSNGSPV 250
           SEL IKV+NDC+     + + +P LSE+AA+LE+KNA+NVPARIGD SVDSCLTS+GSP+
Sbjct: 147 SELQIKVSNDCEGMNPLETIKMPCLSEIAAALENKNAVNVPARIGDCSVDSCLTSSGSPI 206

Query: 249 SPTGVGSQAAALKKRRRPLFSNGDLSPLDSNSRQ-VEWIMSNI 124
           SP G  S+AA +KKR RPLF+ G    L++N RQ VEW+M+N+
Sbjct: 207 SPMGSSSRAAVMKKRSRPLFTGGSSLALENNMRQDVEWMMTNM 249


>ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250267 [Vitis vinifera]
          Length = 307

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/103 (59%), Positives = 80/103 (77%), Gaps = 6/103 (5%)
 Frame = -1

Query: 414 SELAIKVANDCQ-----QVMAVPSLSEVAASLESKNAINVPARIGDFSVDSCLTSNGSPV 250
           SEL IKV+NDC+     + + +P LSE+AA+LE+KNA+NVPARIGD SVDSCLTS+GSP+
Sbjct: 204 SELQIKVSNDCEGMNPLETIKMPCLSEIAAALENKNAVNVPARIGDCSVDSCLTSSGSPI 263

Query: 249 SPTGVGSQAAALKKRRRPLFSNGDLSPLDSNSRQ-VEWIMSNI 124
           SP G  S+ A +KKR RPLF+ G    L++N RQ VEW+M+N+
Sbjct: 264 SPMGASSRGAVMKKRSRPLFTGGSSLALENNMRQDVEWMMTNM 306


>gb|ABK94861.1| unknown [Populus trichocarpa]
          Length = 309

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 6/103 (5%)
 Frame = -1

Query: 414 SELAIKVANDCQQV-----MAVPSLSEVAASLESKNAINVPARIGDFSVDSCLTSNGSPV 250
           SELAIKV+N+C  +     M +PSLSE+AA+L ++NA NVPARIGD SV+SCLTS  SPV
Sbjct: 204 SELAIKVSNECAGIAPLDTMKMPSLSELAAALGNRNASNVPARIGDCSVESCLTSTSSPV 263

Query: 249 SPTGVGSQAAALKKRRRPLFSNGDLSPLDSNSRQ-VEWIMSNI 124
           SP GVGSQ A+ KKR RP+  NGD  P + N RQ VEW MSNI
Sbjct: 264 SPMGVGSQVASTKKRSRPVLGNGDSLPFEGNFRQEVEWTMSNI 306


>emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa]
           gi|327412625|emb|CCA29101.1| putative MYB transcription
           factor [Rosa rugosa]
          Length = 307

 Score =  120 bits (302), Expect = 9e-26
 Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 6/104 (5%)
 Frame = -1

Query: 414 SELAIKVANDCQ-----QVMAVPSLSEVAASLESKNAINVPARIGDFSVDSCLTSNGSPV 250
           SELAIKV++DCQ       + + SLSE+AA++E+K+A NV ARIG+ SVDSCLTS GSP 
Sbjct: 204 SELAIKVSSDCQGMAPLDTIKMQSLSEIAAAIENKSASNVLARIGNCSVDSCLTSTGSPG 263

Query: 249 SPTGVGSQAAALKKRRRPLFSNGDLSPLDSNSRQ-VEWIMSNIS 121
           SP G+ S AAA+KKR+RP FSNGD  PL+ N RQ VEW+MSNI+
Sbjct: 264 SPMGMSSLAAAMKKRQRPFFSNGDSLPLEGNMRQEVEWMMSNIA 307


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