BLASTX nr result
ID: Panax21_contig00036680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00036680
(636 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 348 5e-94
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 348 5e-94
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 337 1e-90
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat... 336 2e-90
ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|2... 333 1e-89
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 348 bits (893), Expect = 5e-94
Identities = 167/211 (79%), Positives = 189/211 (89%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ +HGRQVH+HVL ++LP YVVLQNSLIDMYSKCG+LTYSRRIFDSM ERTVISWNAMLV
Sbjct: 694 ALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLV 753
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
GYSKHG+G++ V LFK M++E KV PD VTFLAVLSGCSHGGME+RGLE+F EMV+ K G
Sbjct: 754 GYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDG 813
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVHQNVDIGEYVG 542
EP+IEHYG VVDL GRAG++E+AF+FIK MPFEPTAAIWGSLLGAC+VHQNV IGE+V
Sbjct: 814 FEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVA 873
Query: 543 NRLLEIEPENAGNYVILSNLLASAGRWNDVR 635
RLLEIE ENAGNYVILSNL ASAGRW+DVR
Sbjct: 874 RRLLEIESENAGNYVILSNLYASAGRWDDVR 904
Score = 85.1 bits (209), Expect = 1e-14
Identities = 47/169 (27%), Positives = 96/169 (56%)
Frame = +3
Query: 6 FEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVG 185
F+ GRQ+H+ V+ + S++ + +SL+DMY+K G + +RR+FD + ER V+S A++ G
Sbjct: 594 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 653
Query: 186 YSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGV 365
Y++ G+ ++ ++LF+ ++ E + + VT+ +VL+ S + G +V ++ K
Sbjct: 654 YAQLGLDEEALDLFRRLQRE-GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPF 712
Query: 366 EPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVH 512
+++ S++D+ + G + + + MP E T W ++L H
Sbjct: 713 YVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKH 758
Score = 77.8 bits (190), Expect = 2e-12
Identities = 47/152 (30%), Positives = 80/152 (52%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ G++VH H++ + V L+ LI +Y+KC L +RR+ D M ER V+SW AM+
Sbjct: 492 AIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMIS 551
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
GYS+ G + ++LF M P++ TF VL+ C+ G ++ ++ K
Sbjct: 552 GYSQRGYASEALHLFVEML-MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI--KTS 608
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMP 458
E I S++D+ +AG+I +A + +P
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 348 bits (893), Expect = 5e-94
Identities = 167/211 (79%), Positives = 189/211 (89%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ +HGRQVH+HVL ++LP YVVLQNSLIDMYSKCG+LTYSRRIFDSM ERTVISWNAMLV
Sbjct: 227 ALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLV 286
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
GYSKHG+G++ V LFK M++E KV PD VTFLAVLSGCSHGGME+RGLE+F EMV+ K G
Sbjct: 287 GYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDG 346
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVHQNVDIGEYVG 542
EP+IEHYG VVDL GRAG++E+AF+FIK MPFEPTAAIWGSLLGAC+VHQNV IGE+V
Sbjct: 347 FEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVA 406
Query: 543 NRLLEIEPENAGNYVILSNLLASAGRWNDVR 635
RLLEIE ENAGNYVILSNL ASAGRW+DVR
Sbjct: 407 RRLLEIESENAGNYVILSNLYASAGRWDDVR 437
Score = 85.1 bits (209), Expect = 1e-14
Identities = 47/169 (27%), Positives = 96/169 (56%)
Frame = +3
Query: 6 FEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVG 185
F+ GRQ+H+ V+ + S++ + +SL+DMY+K G + +RR+FD + ER V+S A++ G
Sbjct: 127 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 186
Query: 186 YSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGV 365
Y++ G+ ++ ++LF+ ++ E + + VT+ +VL+ S + G +V ++ K
Sbjct: 187 YAQLGLDEEALDLFRRLQRE-GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPF 245
Query: 366 EPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVH 512
+++ S++D+ + G + + + MP E T W ++L H
Sbjct: 246 YVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKH 291
Score = 77.8 bits (190), Expect = 2e-12
Identities = 47/152 (30%), Positives = 80/152 (52%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ G++VH H++ + V L+ LI +Y+KC L +RR+ D M ER V+SW AM+
Sbjct: 25 AIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMIS 84
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
GYS+ G + ++LF M P++ TF VL+ C+ G ++ ++ K
Sbjct: 85 GYSQRGYASEALHLFVEML-MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI--KTS 141
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMP 458
E I S++D+ +AG+I +A + +P
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 337 bits (863), Expect = 1e-90
Identities = 160/206 (77%), Positives = 183/206 (88%)
Frame = +3
Query: 15 GRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVGYSK 194
G+QVHNHVL SE+PS+VVLQNSLIDMYSKCGNLTYSRRIFD+M ERTVISWNAMLVGYSK
Sbjct: 485 GKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 544
Query: 195 HGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGVEPD 374
HG G++V+ LF MR+E KV PD VT LAVLSGCSHGG+E++GL +F++M SGK VEP
Sbjct: 545 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 604
Query: 375 IEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVHQNVDIGEYVGNRLL 554
+EHYG VVDLLGR+G++E+AF+FIK MPFEPTAAIWGSLLGAC+VH NVDIGE+ G +LL
Sbjct: 605 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLL 664
Query: 555 EIEPENAGNYVILSNLLASAGRWNDV 632
EIEP NAGNYVILSNL ASAGRW DV
Sbjct: 665 EIEPGNAGNYVILSNLYASAGRWEDV 690
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/166 (24%), Positives = 89/166 (53%)
Frame = +3
Query: 15 GRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVGYSK 194
GRQ+H+ ++ +V + +SL+DMY+K G + +R +F+ + ER V+S A++ GY++
Sbjct: 384 GRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQ 443
Query: 195 HGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGVEPD 374
G+ ++ + LF+ ++ E + + VT+ VL+ S + G +V + ++ + +
Sbjct: 444 LGLDEEALELFRRLQGE-GMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE--IPSF 500
Query: 375 IEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVH 512
+ S++D+ + G + + + M +E T W ++L H
Sbjct: 501 VVLQNSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGYSKH 545
Score = 70.1 bits (170), Expect = 3e-10
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+F G++VH H++ + V L+ LI +Y+KC +L + +FD M ER V+SW AM+
Sbjct: 258 AFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMIS 317
Query: 183 GYSKHGMGQDVVNLF----------KFMRDEKKVM----------PDKVTFLAVLSGCSH 302
YS+ G +NLF + D+ K+ P++ TF VL+ C+
Sbjct: 318 AYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTS 377
Query: 303 GGMENRGLEVFDEMVSGKYGVEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMP 458
G ++ ++ K E + S++D+ + G+I +A + +P
Sbjct: 378 SLGFILGRQIHSLII--KLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 336 bits (861), Expect = 2e-90
Identities = 155/211 (73%), Positives = 186/211 (88%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ +HG+QVHNH+L SE+PSYVVLQNSLIDMYSKCGNLTY+RRIFD++ ERTVISWNAMLV
Sbjct: 275 ALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLV 334
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
GYSKHG G++V+ LF M DE KV PD VT LAVLSGCSHGG+E++G+++F +M SGK
Sbjct: 335 GYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKIS 394
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVHQNVDIGEYVG 542
V+PD +HYG VVD+LGRAG++E AF+F+K MPFEP+AAIWG LLGAC VH N+DIGE+VG
Sbjct: 395 VQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVG 454
Query: 543 NRLLEIEPENAGNYVILSNLLASAGRWNDVR 635
++LL+IEPENAGNYVILSNL ASAGRW DVR
Sbjct: 455 HQLLQIEPENAGNYVILSNLYASAGRWEDVR 485
Score = 75.1 bits (183), Expect = 1e-11
Identities = 45/169 (26%), Positives = 91/169 (53%)
Frame = +3
Query: 6 FEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVG 185
F GRQ+H+H++ ++V + +SL+DMY+K G + +R IF + ER V+S A++ G
Sbjct: 175 FVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISG 234
Query: 186 YSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGV 365
Y++ G+ ++ + LF+ ++ E + + VT+ +VL+ S + G +V + ++ + V
Sbjct: 235 YAQLGLDEEALELFRRLQRE-GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSE--V 291
Query: 366 EPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVH 512
+ S++D+ + G + A + + E T W ++L H
Sbjct: 292 PSYVVLQNSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAMLVGYSKH 339
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/152 (28%), Positives = 75/152 (49%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ G++VH H++ + V L+ LI Y KC +L +R +FD M ER V+SW AM+
Sbjct: 73 AIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMIS 132
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
YS+ G ++LF M P++ TF VL+ C G ++ ++ K
Sbjct: 133 AYSQRGYASQALSLFVQML-RSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHII--KLN 189
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMP 458
E + S++D+ + G+I +A + +P
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221
>ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|222867324|gb|EEF04455.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 333 bits (855), Expect = 1e-89
Identities = 159/211 (75%), Positives = 184/211 (87%)
Frame = +3
Query: 3 SFEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLV 182
+ +HG+QVH+HVL ELP YVVLQNSLIDMYSKCGNL Y+R+IF++M RTVISWNAMLV
Sbjct: 227 ALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLV 286
Query: 183 GYSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYG 362
GYSKHG G +VV LFK MR+E KV PD VTFLAVLSGCSHGG+E++GLE+FDEM++G
Sbjct: 287 GYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDE 346
Query: 363 VEPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVHQNVDIGEYVG 542
+E IEHYG V+DLLGRAG++E+AF+ IK MPFEPTAAIWGSLLGAC+VH N +IGE+VG
Sbjct: 347 IEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVG 406
Query: 543 NRLLEIEPENAGNYVILSNLLASAGRWNDVR 635
RLLEIEPENAGNYVILSNL ASAGRW DVR
Sbjct: 407 CRLLEIEPENAGNYVILSNLYASAGRWEDVR 437
Score = 80.5 bits (197), Expect = 2e-13
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Frame = +3
Query: 15 GRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVGYSK 194
G++VH H++ + V L LI +Y+KC L +R +FD M ER V+SW AM+ GYS+
Sbjct: 29 GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88
Query: 195 HGMGQDVVNLF-KFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGVEP 371
G + ++LF + +R + + P++ TF VLS C+ G ++ + Y E
Sbjct: 89 RGFASEALHLFVQMLRSDTE--PNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNY--EN 144
Query: 372 DIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVHQNVDIGEYVGNRL 551
I S++D+ +AG+I +A + +P + + G + + + E
Sbjct: 145 HIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISG----YAQLGLDEEALELF 200
Query: 552 LEIEPEN-AGNYVILSNLLAS 611
++ E + NYV ++LL +
Sbjct: 201 CRLQREGMSSNYVTYASLLTA 221
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/169 (26%), Positives = 92/169 (54%)
Frame = +3
Query: 6 FEHGRQVHNHVLWSELPSYVVLQNSLIDMYSKCGNLTYSRRIFDSMSERTVISWNAMLVG 185
FE GRQ+H+H+ +++ + +SL+DMY+K G + +R +F+ + ER V+S A++ G
Sbjct: 127 FELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISG 186
Query: 186 YSKHGMGQDVVNLFKFMRDEKKVMPDKVTFLAVLSGCSHGGMENRGLEVFDEMVSGKYGV 365
Y++ G+ ++ + LF ++ E + + VT+ ++L+ S + G +V ++ +
Sbjct: 187 YAQLGLDEEALELFCRLQRE-GMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPF 245
Query: 366 EPDIEHYGSVVDLLGRAGQIEKAFKFIKHMPFEPTAAIWGSLLGACKVH 512
+++ S++D+ + G + A K +MP T W ++L H
Sbjct: 246 YVVLQN--SLIDMYSKCGNLNYARKIFNNMPVR-TVISWNAMLVGYSKH 291