BLASTX nr result

ID: Panax21_contig00036665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036665
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
emb|CBI22967.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...    69   3e-10
ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-li...    55   6e-06

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/90 (43%), Positives = 51/90 (56%)
 Frame = +2

Query: 2   HAKRRQELHLRSSKKRAKSPMNTGGMKDEKGKSGKENRQPXXXXXXXXXXXXXXXEMTDK 181
           H KRR++L  R SKKR KSP+  G  K    KSGKE                   ++   
Sbjct: 584 HDKRRKDLQFRLSKKRVKSPLRRGCNKGSGDKSGKETSPSINSS-----------QLNGN 632

Query: 182 FSLNLGKVEGVRGTPESKRKRRSRFVEPVN 271
           F++ LGK+ G R TPESK++RR+RFVEPV+
Sbjct: 633 FTVKLGKIGGARCTPESKKRRRARFVEPVD 662


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/88 (45%), Positives = 51/88 (57%)
 Frame = +2

Query: 8    KRRQELHLRSSKKRAKSPMNTGGMKDEKGKSGKENRQPXXXXXXXXXXXXXXXEMTDKFS 187
            KRR+E+ LRS+KKRAKSP      K ++ KS  ENR P               +   KFS
Sbjct: 1193 KRREEVQLRSTKKRAKSPTKKECTKGKRDKSEIENRPPVSSSSTTALQP----QPNCKFS 1248

Query: 188  LNLGKVEGVRGTPESKRKRRSRFVEPVN 271
            + LGK+  +R TPE KR+RRSR  EPV+
Sbjct: 1249 VKLGKINPIRCTPERKRRRRSRIAEPVD 1276


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/88 (45%), Positives = 51/88 (57%)
 Frame = +2

Query: 8   KRRQELHLRSSKKRAKSPMNTGGMKDEKGKSGKENRQPXXXXXXXXXXXXXXXEMTDKFS 187
           KRR+E+ LRS+KKRAKSP      K ++ KS  ENR P               +   KFS
Sbjct: 578 KRREEVQLRSTKKRAKSPTKKECTKGKRDKSEIENRPPVSSSSTTALQP----QPNCKFS 633

Query: 188 LNLGKVEGVRGTPESKRKRRSRFVEPVN 271
           + LGK+  +R TPE KR+RRSR  EPV+
Sbjct: 634 VKLGKINPIRCTPERKRRRRSRIAEPVD 661


>ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
          Length = 673

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/89 (37%), Positives = 49/89 (55%)
 Frame = +2

Query: 5   AKRRQELHLRSSKKRAKSPMNTGGMKDEKGKSGKENRQPXXXXXXXXXXXXXXXEMTDKF 184
           +K R+ + LR  KKRAKSP      + +K K+ ++                       KF
Sbjct: 585 SKEREGVQLRLPKKRAKSPTKNPSTQGDKNKTVRKKSPSSSRHGSTGVSPPTNC----KF 640

Query: 185 SLNLGKVEGVRGTPESKRKRRSRFVEPVN 271
           S+ LGKV G++ +PE+KR+RRS++VEPVN
Sbjct: 641 SVKLGKVSGMK-SPEAKRRRRSQYVEPVN 668


Top