BLASTX nr result

ID: Panax21_contig00036648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036648
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006666139.1| cytochrome c oxidase subunit II (mitochondri...   293   5e-79
ref|YP_003587242.1| cytochrome c oxidase subunit 2 [Citrullus la...   284   1e-74
gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi...   283   1e-74
gb|AAF43639.1|AF207682_1 cytochrome oxidase subunit 2 [Amphicarp...   278   6e-73
gb|AAF43631.1|AF207673_1 cytochrome oxidase subunit 2 [Pseudemin...   278   6e-73

>ref|YP_006666139.1| cytochrome c oxidase subunit II (mitochondrion) [Malus x domestica]
           gi|401661942|emb|CBX33403.1| cox2 (mitochondrion) [Malus
           x domestica]
          Length = 306

 Score =  293 bits (750), Expect(2) = 5e-79
 Identities = 147/180 (81%), Positives = 148/180 (82%)
 Frame = +3

Query: 87  FWGGAEQSKNEPNQMIVLEWLFLTISPCDAAEPWQLGSQDAATPMMQGXXXXXXXXXXXX 266
           FWGGAEQ KNEP QMIVLEWLFLTI PCDAAEPWQLG QDAATPMMQG            
Sbjct: 33  FWGGAEQLKNEPTQMIVLEWLFLTIVPCDAAEPWQLGFQDAATPMMQGIMDLHHDIFFFL 92

Query: 267 XXXXXXXXXXXVRALWHFHYKKNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYS 446
                      VRALWHFHYKKN IPQRIVHGTTIEIL TIFPSIILMFIAIPSFALLYS
Sbjct: 93  ILILVFVSRILVRALWHFHYKKNPIPQRIVHGTTIEILRTIFPSIILMFIAIPSFALLYS 152

Query: 447 MDEVVVDPAMTIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 626
           MDEVVVDPA+TIKAIGHQWY TYEYSDYNSSDEQSLTFDSY IPEDDLELGQ RLLEVDN
Sbjct: 153 MDEVVVDPAITIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDN 212



 Score = 27.3 bits (59), Expect(2) = 5e-79
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 1  TPMPFLVGPTQPAIFVCFPELGEQDSLFIFGG 96
          +PM FLVG  QPA  V      +  SLF F G
Sbjct: 4  SPMFFLVGKAQPATSVFLNWESKNKSLFFFWG 35


>ref|YP_003587242.1| cytochrome c oxidase subunit 2 [Citrullus lanatus]
           gi|259156768|gb|ACV96630.1| cytochrome c oxidase subunit
           2 [Citrullus lanatus]
          Length = 260

 Score =  284 bits (726), Expect = 1e-74
 Identities = 139/166 (83%), Positives = 142/166 (85%)
 Frame = +3

Query: 129 MIVLEWLFLTISPCDAAEPWQLGSQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRA 308
           MIVL+WLFLTI+PCDAAEPWQLG QDAATPMMQG                       VRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILIFVFVSWILVRA 60

Query: 309 LWHFHYKKNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAMTIKA 488
           LWHFHY+KNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYQKNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 489 IGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 626
           IGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN
Sbjct: 121 IGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 166


>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
           gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
           [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
           oxidase subunit 2 [Boehmeria nivea]
          Length = 310

 Score =  283 bits (725), Expect = 1e-74
 Identities = 142/179 (79%), Positives = 149/179 (83%)
 Frame = +3

Query: 90  WGGAEQSKNEPNQMIVLEWLFLTISPCDAAEPWQLGSQDAATPMMQGXXXXXXXXXXXXX 269
           + GAEQSK++P +MI+   LFLTISPCDAAEPWQLG QDAATPMMQG             
Sbjct: 20  FSGAEQSKSKPQKMIL--GLFLTISPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLI 77

Query: 270 XXXXXXXXXXVRALWHFHYKKNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSM 449
                     VRALWHFHY+KN IPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSM
Sbjct: 78  LILVFVLWILVRALWHFHYQKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSM 137

Query: 450 DEVVVDPAMTIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 626
           DEVVVDPA+TIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN
Sbjct: 138 DEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 196


>gb|AAF43639.1|AF207682_1 cytochrome oxidase subunit 2 [Amphicarpaea bracteata]
          Length = 253

 Score =  278 bits (711), Expect = 6e-73
 Identities = 136/163 (83%), Positives = 138/163 (84%)
 Frame = +3

Query: 138 LEWLFLTISPCDAAEPWQLGSQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWH 317
           LEWLFLTI+PCDAAEPWQLG QDAATPMMQG                       VRALWH
Sbjct: 3   LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWILVRALWH 62

Query: 318 FHYKKNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAMTIKAIGH 497
           FHYKKN IPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPA+TIKAIGH
Sbjct: 63  FHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGH 122

Query: 498 QWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 626
           QWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN
Sbjct: 123 QWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 165


>gb|AAF43631.1|AF207673_1 cytochrome oxidase subunit 2 [Pseudeminia comosa]
           gi|7248724|gb|AAF43637.1|AF207679_1 cytochrome oxidase
           subunit 2 [Pachyrhizus erosus]
           gi|7248726|gb|AAF43638.1|AF207680_1 cytochrome oxidase
           subunit 2 [Calopogonium caeruleum]
           gi|6752680|gb|AAF27822.1| cytochrome oxidase subunit 2
           [Pseudovigna argentea]
          Length = 253

 Score =  278 bits (711), Expect = 6e-73
 Identities = 136/163 (83%), Positives = 138/163 (84%)
 Frame = +3

Query: 138 LEWLFLTISPCDAAEPWQLGSQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWH 317
           LEWLFLTI+PCDAAEPWQLG QDAATPMMQG                       VRALWH
Sbjct: 3   LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWILVRALWH 62

Query: 318 FHYKKNKIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAMTIKAIGH 497
           FHYKKN IPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPA+TIKAIGH
Sbjct: 63  FHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGH 122

Query: 498 QWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 626
           QWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN
Sbjct: 123 QWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDN 165


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