BLASTX nr result

ID: Panax21_contig00036645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036645
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [C...   160   5e-61
ref|NP_973611.1| E2F transcription factor 3 [Arabidopsis thalian...   134   3e-52
emb|CAC34724.1| E2F-4 protein [Arabidopsis thaliana]                  134   4e-52
ref|XP_003580976.1| PREDICTED: transcription factor E2FB-like [B...   114   8e-44
ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [V...   180   2e-43

>ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [Cucumis sativus]
           gi|449521766|ref|XP_004167900.1| PREDICTED:
           transcription factor E2FC-like [Cucumis sativus]
          Length = 410

 Score =  160 bits (404), Expect(2) = 5e-61
 Identities = 78/150 (52%), Positives = 108/150 (72%)
 Frame = -3

Query: 535 LKG*A*LRK*QKNQIRWKGFEMLGPWELNYQVTQLKAELENLYAEDNRLKDRIRETHERL 356
           L+G   + K   N IRWKG E  GP ELN QV +LK E+++LYA++ RL + IR   E L
Sbjct: 201 LEGIGLIEKTTTNHIRWKGGERRGPQELNDQVGRLKDEVKSLYADERRLDELIRMKQELL 260

Query: 355 RAMQCDENYQKHLFVREEDIMSLPCFKNKTLIVVKAPRASYVEVPDPDEDLAFPQREFRL 176
           R ++ + +Y+ HLF+ EEDI+ +PCFKN+TLI VKAP+AS +EVPDPDE+  F +R+ R+
Sbjct: 261 RNLEQNAHYRNHLFITEEDILRIPCFKNQTLIAVKAPQASCIEVPDPDEEACFSERQCRM 320

Query: 175 IVRSTTGPVDLYLLSKREKECEDITMKNTK 86
           I++STTGP+DLYLL   ++E E+ T K  K
Sbjct: 321 IIKSTTGPIDLYLLRTAKQELEENTSKQAK 350



 Score =  100 bits (250), Expect(2) = 5e-61
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = -2

Query: 713 ENADNVNLATSCRYDSSLGLLMKKFISLIQEAKDGILDLNKTADMLDVKKRRIYDITNVL 534
           E  D+ N +T+ RYDSSLG L KKFI L+QEA+DG LDLNKTAD+L V+KRRIYDITNVL
Sbjct: 142 EPVDSPNQSTNGRYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVLKVQKRRIYDITNVL 201

Query: 533 EGIGLIEK 510
           EGIGLIEK
Sbjct: 202 EGIGLIEK 209


>ref|NP_973611.1| E2F transcription factor 3 [Arabidopsis thaliana]
           gi|75309248|sp|Q9FNY0.1|E2FA_ARATH RecName:
           Full=Transcription factor E2FA; AltName: Full=E2F
           transcription factor-3; Short=AtE2F3
           gi|11125657|emb|CAC15486.1| E2F-related protein
           [Arabidopsis thaliana] gi|111074220|gb|ABH04483.1|
           At2g36010 [Arabidopsis thaliana]
           gi|330254098|gb|AEC09192.1| E2F transcription factor 3
           [Arabidopsis thaliana]
          Length = 485

 Score =  134 bits (338), Expect(2) = 3e-52
 Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
 Frame = -3

Query: 535 LKG*A*LRK*QKNQIRWKGFEML-GPWELNYQVTQLKAELENLYAEDNRLKDRIRETHER 359
           L+G   + K  KN+I WKG +   G  + +  V QL+AE+ENL  E+  L ++IR+T ER
Sbjct: 214 LEGIDLIEKPFKNRILWKGVDACPGDEDADVSVLQLQAEIENLALEEQALDNQIRQTEER 273

Query: 358 LRAMQCDENYQKHLFVREEDIMSLPCFKNKTLIVVKAPRASYVEVPDPDEDLAFPQREFR 179
           LR +  +E  QK LFV EEDI SLP F+N+TLI VKAP  + +EVPDPDE    PQR +R
Sbjct: 274 LRDLSENEKNQKWLFVTEEDIKSLPGFQNQTLIAVKAPHGTTLEVPDPDEAADHPQRRYR 333

Query: 178 LIVRSTTGPVDLYLLSKREKECEDITMKNTK-----SMDSSAGNGGRYRDANALS 29
           +I+RST GP+D+YL+S+ E + ED             + SS+G+ G + D  AL+
Sbjct: 334 IILRSTMGPIDVYLVSEFEGKFEDTNGSGAAPPACLPIASSSGSTG-HHDIEALT 387



 Score = 97.1 bits (240), Expect(2) = 3e-52
 Identities = 48/71 (67%), Positives = 60/71 (84%)
 Frame = -2

Query: 722 SNAENADNVNLATSCRYDSSLGLLMKKFISLIQEAKDGILDLNKTADMLDVKKRRIYDIT 543
           +NA +   +  + SCRYDSSLGLL KKF++LI++AKDG+LDLNK A+ L+V+KRRIYDIT
Sbjct: 152 TNAGSPITLTPSGSCRYDSSLGLLTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDIT 211

Query: 542 NVLEGIGLIEK 510
           NVLEGI LIEK
Sbjct: 212 NVLEGIDLIEK 222


>emb|CAC34724.1| E2F-4 protein [Arabidopsis thaliana]
          Length = 485

 Score =  134 bits (337), Expect(2) = 4e-52
 Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
 Frame = -3

Query: 535 LKG*A*LRK*QKNQIRWKGFEML-GPWELNYQVTQLKAELENLYAEDNRLKDRIRETHER 359
           L+G   + K  KN+I WKG +   G  + +  V QL+AE+ENL  E+  L ++IR+T ER
Sbjct: 214 LEGIDLIEKPFKNRILWKGVDACPGDEDADVSVLQLQAEIENLALEEQALGNQIRQTEER 273

Query: 358 LRAMQCDENYQKHLFVREEDIMSLPCFKNKTLIVVKAPRASYVEVPDPDEDLAFPQREFR 179
           LR +  +E  QK LFV EEDI SLP F+N+TLI VKAP  + +EVPDPDE    PQR +R
Sbjct: 274 LRDLSENEKNQKWLFVTEEDIKSLPGFQNQTLIAVKAPHGTTLEVPDPDEAADHPQRRYR 333

Query: 178 LIVRSTTGPVDLYLLSKREKECEDITMKNTK-----SMDSSAGNGGRYRDANALS 29
           +I+RST GP+D+YL+S+ E + ED             + SS+G+ G + D  AL+
Sbjct: 334 IILRSTMGPIDVYLVSEFEGKFEDTNGSGAAPPACLPIASSSGSTG-HHDIEALT 387



 Score = 97.1 bits (240), Expect(2) = 4e-52
 Identities = 48/71 (67%), Positives = 60/71 (84%)
 Frame = -2

Query: 722 SNAENADNVNLATSCRYDSSLGLLMKKFISLIQEAKDGILDLNKTADMLDVKKRRIYDIT 543
           +NA +   +  + SCRYDSSLGLL KKF++LI++AKDG+LDLNK A+ L+V+KRRIYDIT
Sbjct: 152 TNAGSPITLTPSGSCRYDSSLGLLTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDIT 211

Query: 542 NVLEGIGLIEK 510
           NVLEGI LIEK
Sbjct: 212 NVLEGIDLIEK 222


>ref|XP_003580976.1| PREDICTED: transcription factor E2FB-like [Brachypodium distachyon]
          Length = 468

 Score =  114 bits (286), Expect(2) = 8e-44
 Identities = 56/145 (38%), Positives = 96/145 (66%), Gaps = 6/145 (4%)
 Frame = -3

Query: 535 LKG*A*LRK*QKNQIRWKGFEMLGPWELNYQVTQLKAELENLYAEDNRLKDRIRETHERL 356
           L+G   + K  KN IRWKGF+M+ P E+  + ++LK E+E+ Y ED RL + I +   +L
Sbjct: 232 LEGVDLIEKGLKNMIRWKGFDMIMPKEMERRTSELKEEIESSYDEDYRLDEEILKVQAKL 291

Query: 355 RAMQCDENYQKHLFVREEDIMSLPCFKNKTLIVVKAPRASYVEVPDPD------EDLAFP 194
            A++ +++ +K L++  EDI+ +P F+  TLI +KAPR + VEV DP+      +DL   
Sbjct: 292 EALKVNKDTRKWLYLSREDIIKIPRFQGSTLIAIKAPRGTCVEVRDPNADMDIFKDLESQ 351

Query: 193 QREFRLIVRSTTGPVDLYLLSKREK 119
           ++++R+++RS+ GP+D YL+S  ++
Sbjct: 352 EKQYRILLRSSMGPIDCYLISDHQE 376



 Score = 89.0 bits (219), Expect(2) = 8e-44
 Identities = 42/58 (72%), Positives = 52/58 (89%)
 Frame = -2

Query: 683 SCRYDSSLGLLMKKFISLIQEAKDGILDLNKTADMLDVKKRRIYDITNVLEGIGLIEK 510
           +CRYD+SLGLL KKFI+L++ A+DG LDLNK A+ L+V+KRRIYDITNVLEG+ LIEK
Sbjct: 183 NCRYDNSLGLLTKKFINLLRGAEDGTLDLNKAAETLEVQKRRIYDITNVLEGVDLIEK 240


>ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [Vitis vinifera]
          Length = 437

 Score =  180 bits (457), Expect = 2e-43
 Identities = 95/172 (55%), Positives = 122/172 (70%), Gaps = 2/172 (1%)
 Frame = -3

Query: 535 LKG*A*LRK*QKNQIRWKGFEMLGPWELNYQVTQLKAELENLYAEDNRLKDRIRETHERL 356
           L+G   + K  KN I WKGF+M GP +++ +VT+LKAE+E LYAE+ RL D IRE  E L
Sbjct: 195 LEGIGLIEKTSKNHISWKGFDMSGPQKMDNEVTRLKAEVERLYAEECRLDDCIREKQELL 254

Query: 355 RAMQCDENYQKHLFVREEDIMSLPCFKNKTLIVVKAPRASYVEVPDPDEDLAFPQREFRL 176
           RA+  DEN QKHLF+ EEDI +LPCF+N+TLI +KAP+AS VEVPDPDED+ F QR+FR+
Sbjct: 255 RAIAGDENCQKHLFLTEEDITTLPCFQNQTLIAIKAPQASSVEVPDPDEDIGFSQRQFRI 314

Query: 175 IVRSTTGPVDLYLLSKREKECEDITMKNTKSMDSSAGNGG--RYRDANALSS 26
           I+RSTTGP+DLYLL            + TKS+D S  + G  + +DA   SS
Sbjct: 315 IIRSTTGPIDLYLL------------RRTKSLDYSVEDSGCNKLQDAGPFSS 354



 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = -2

Query: 722 SNAENADNVNLATSCRYDSSLGLLMKKFISLIQEAKDGILDLNKTADMLDVKKRRIYDIT 543
           SNAE+ + +N   +CRYDSSLGLL KKFISLIQEAKDG LDLN+TAD+L+V+KRRIYDIT
Sbjct: 133 SNAESPNILNPVVTCRYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVLEVQKRRIYDIT 192

Query: 542 NVLEGIGLIEKIAK 501
           NVLEGIGLIEK +K
Sbjct: 193 NVLEGIGLIEKTSK 206


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