BLASTX nr result

ID: Panax21_contig00036629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036629
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   265   6e-69
emb|CBI20932.3| unnamed protein product [Vitis vinifera]              265   6e-69
ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   258   7e-67
emb|CBI28122.3| unnamed protein product [Vitis vinifera]              258   7e-67
emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]   252   3e-65

>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
           vinifera]
          Length = 421

 Score =  265 bits (676), Expect = 6e-69
 Identities = 128/198 (64%), Positives = 149/198 (75%)
 Frame = +2

Query: 2   SSEEEEGQNNFTRIQNGPTMRVPNARLIVLVDQFKMALDCFFAVWFVVGNVWIFGGNSSA 181
           +SEEE+ Q +    +N  ++R  +ARL VLV+ FKMALDCFFAVWFVVGNVWIFGG+SS+
Sbjct: 197 TSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSS 256

Query: 182 ADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXXXXXGVREDVNEMRGASEESIN 361
           ++APNLYRLCIVFLTFSCIGYAMPFILC              G RED+ + RGA+ ESIN
Sbjct: 257 SEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSESIN 316

Query: 362 ALPKHKFQLKXXXXXXXXXXXXGVDEGGLVAAGTEKERAISGEDAVCCICLARYVDKDEL 541
           ALP +KF+LK            G  EGG+VAAGTE+ER ISGEDAVCCICLA+Y + DEL
Sbjct: 317 ALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDEL 376

Query: 542 RELPCSHFFHTECVDKWL 595
           RELPCSHFFH ECVDKWL
Sbjct: 377 RELPCSHFFHKECVDKWL 394


>emb|CBI20932.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  265 bits (676), Expect = 6e-69
 Identities = 128/198 (64%), Positives = 149/198 (75%)
 Frame = +2

Query: 2   SSEEEEGQNNFTRIQNGPTMRVPNARLIVLVDQFKMALDCFFAVWFVVGNVWIFGGNSSA 181
           +SEEE+ Q +    +N  ++R  +ARL VLV+ FKMALDCFFAVWFVVGNVWIFGG+SS+
Sbjct: 177 TSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSS 236

Query: 182 ADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXXXXXGVREDVNEMRGASEESIN 361
           ++APNLYRLCIVFLTFSCIGYAMPFILC              G RED+ + RGA+ ESIN
Sbjct: 237 SEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSESIN 296

Query: 362 ALPKHKFQLKXXXXXXXXXXXXGVDEGGLVAAGTEKERAISGEDAVCCICLARYVDKDEL 541
           ALP +KF+LK            G  EGG+VAAGTE+ER ISGEDAVCCICLA+Y + DEL
Sbjct: 297 ALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDEL 356

Query: 542 RELPCSHFFHTECVDKWL 595
           RELPCSHFFH ECVDKWL
Sbjct: 357 RELPCSHFFHKECVDKWL 374


>ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
           vinifera]
          Length = 427

 Score =  258 bits (658), Expect = 7e-67
 Identities = 132/198 (66%), Positives = 144/198 (72%)
 Frame = +2

Query: 2   SSEEEEGQNNFTRIQNGPTMRVPNARLIVLVDQFKMALDCFFAVWFVVGNVWIFGGNSSA 181
           S+ EE   +  T   NG TM   NARL VL D +KMALDCFFAVWFVVGNVWIFGG+SS 
Sbjct: 202 SAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGHSSF 261

Query: 182 ADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXXXXXGVREDVNEMRGASEESIN 361
             APNLYRLCIVFLTFSCIGYAMPFILC M            G   D++++RGAS ESIN
Sbjct: 262 TAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISILG-HGDLSQVRGASAESIN 320

Query: 362 ALPKHKFQLKXXXXXXXXXXXXGVDEGGLVAAGTEKERAISGEDAVCCICLARYVDKDEL 541
           ALP +KF+LK            GV EGG+V AGTEKERAISGEDAVCCICL RY D DEL
Sbjct: 321 ALPTYKFKLKKNGSGNSGEISSGV-EGGVVGAGTEKERAISGEDAVCCICLTRYADDDEL 379

Query: 542 RELPCSHFFHTECVDKWL 595
           RELPCSHFFH+ECVDKWL
Sbjct: 380 RELPCSHFFHSECVDKWL 397


>emb|CBI28122.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  258 bits (658), Expect = 7e-67
 Identities = 132/198 (66%), Positives = 144/198 (72%)
 Frame = +2

Query: 2   SSEEEEGQNNFTRIQNGPTMRVPNARLIVLVDQFKMALDCFFAVWFVVGNVWIFGGNSSA 181
           S+ EE   +  T   NG TM   NARL VL D +KMALDCFFAVWFVVGNVWIFGG+SS 
Sbjct: 182 SAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGHSSF 241

Query: 182 ADAPNLYRLCIVFLTFSCIGYAMPFILCGMXXXXXXXXXXXXGVREDVNEMRGASEESIN 361
             APNLYRLCIVFLTFSCIGYAMPFILC M            G   D++++RGAS ESIN
Sbjct: 242 TAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISILG-HGDLSQVRGASAESIN 300

Query: 362 ALPKHKFQLKXXXXXXXXXXXXGVDEGGLVAAGTEKERAISGEDAVCCICLARYVDKDEL 541
           ALP +KF+LK            GV EGG+V AGTEKERAISGEDAVCCICL RY D DEL
Sbjct: 301 ALPTYKFKLKKNGSGNSGEISSGV-EGGVVGAGTEKERAISGEDAVCCICLTRYADDDEL 359

Query: 542 RELPCSHFFHTECVDKWL 595
           RELPCSHFFH+ECVDKWL
Sbjct: 360 RELPCSHFFHSECVDKWL 377


>emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
          Length = 547

 Score =  252 bits (644), Expect = 3e-65
 Identities = 120/173 (69%), Positives = 134/173 (77%)
 Frame = +2

Query: 77  RLIVLVDQFKMALDCFFAVWFVVGNVWIFGGNSSAADAPNLYRLCIVFLTFSCIGYAMPF 256
           RL VLV+ FKMALDCFFAVWFVVGNVWIFGG+SS+++APNLYRLCIVFLTFSCIGYAMPF
Sbjct: 337 RLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPF 396

Query: 257 ILCGMXXXXXXXXXXXXGVREDVNEMRGASEESINALPKHKFQLKXXXXXXXXXXXXGVD 436
           ILC              G RED+ + RGA+ ESINALP +KF+LK            G  
Sbjct: 397 ILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAG 456

Query: 437 EGGLVAAGTEKERAISGEDAVCCICLARYVDKDELRELPCSHFFHTECVDKWL 595
           EGG+VAAGTE+ER ISGEDAVCCICLA+Y + DELRELPCSHFFH ECVDKWL
Sbjct: 457 EGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWL 509


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